MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv2515c · 46 genes shown · open gene page → · ← back to 1 hop

Evidence: Min score 0
Rv2515c (family_assigned) — XRE family transcriptional regulator Rv2515c Rv2514c (family_assigned) — DUF4411 family protein Rv2514c Rv0332 (family_assigned) — hypothetical protein Rv0332 Rv1371 (family_assigned) — cytochrome b5 domain-containing protein Rv1371 PPE42 (family_assigned) — PPE family protein PPE42 PPE42 papA5 (requalified) — phthiocerol/phthiodiolone dimycocerosyl transferas papA5 Rv2516c (dark) — hypothetical protein Rv2516c Rv2517c (dark) — hypothetical protein Rv2517c Rv2017 (family_assigned) — ImmA/IrrE family metallo-endopeptidase Rv2017 mmpL7 (requalified) — phthiocerol dimycocerosate RND transporter MmpL7 mmpL7 Rv3190c (dark) — hypothetical protein Rv3190c PPE13 (family_assigned) — PPE family protein PPE13 PPE13 PPE34 (family_assigned) — PPE family protein PPE34 PPE34 Rv0333 (family_assigned) — nuclear transport factor 2 family protein Rv0333 rmlA (requalified) — glucose-1-phosphate thymidylyltransferase RfbA rmlA Rv0331 (requalified) — FAD/NAD(P)-binding oxidoreductase Rv0331 udgA (family_assigned) — UDP-glucose/GDP-mannose dehydrogenase family prote udgA plsC (family_assigned) — HAD-IB family hydrolase plsC Rv1372 (family_assigned) — alpha-pyrone synthesis polyketide synthase-like pr Rv1372 Rv1373 (requalified) — glycolipid sulfotransferase Rv1373 Rv1937 (requalified) — FAD-binding oxidoreductase Rv1937 lprF (requalified) — lipoprotein LprF lprF dnaJ2 (requalified) — molecular chaperone DnaJ dnaJ2 dnaJ1 (requalified) — chaperone protein DnaJ dnaJ1 Rv2209 (requalified) — MFS transporter Rv2209 Rv1004c (family_assigned) — hypothetical protein Rv1004c PE_PGRS30 (family_assigned) — PE-PGRS family protein PE_PGRS30 PE_PGRS30 PE_PGRS28 (family_assigned) — PE-PGRS family protein PE_PGRS28 PE_PGRS28 PE_PGRS15 (family_assigned) — PE-PGRS family protein PE_PGRS15 PE_PGRS15 PE_PGRS43 (family_assigned) — PE-PGRS family protein PE_PGRS43 PE_PGRS43 drrB (family_assigned) — daunorubicin ABC transporter permease DrrB drrB drrC (family_assigned) — ABC transporter permease drrC ppsE (requalified) — phthiocerol type I polyketide synthase PpsE ppsE drrA (family_assigned) — daunorubicin ABC transporter ATP-binding protein D drrA ppsD (requalified) — phthiocerol type I polyketide synthase PpsD ppsD ppsC (requalified) — phthiocerol type I polyketide synthase PpsC ppsC lat (requalified) — L-lysine 6-transaminase lat bkdA (family_assigned) — pyruvate dehydrogenase (acetyl-transferring) E1 co bkdA Rv1152 (family_assigned) — GntR family transcriptional regulator Rv1152 Rv2016 (dark) — hypothetical protein Rv2016 Rv0792c (family_assigned) — GntR family transcriptional regulator Rv0792c Rv2912c (family_assigned) — TetR/AcrR family transcriptional regulator Rv2912c mce3R (family_assigned) — TetR family transcriptional regulator Mce3R mce3R Rv3066 (family_assigned) — TetR/AcrR family transcriptional regulator Rv3066 Rv2011c (family_assigned) — MarR family winged helix-turn-helix transcriptiona Rv2011c fadD28 (requalified) — fatty-acid--AMP ligase FAAL28/FadD28 fadD28

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.