MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv2504c · 40 genes shown · anchor scoB · open gene page → · ← back to 1 hop

Evidence: Min score 0
scoA (family_assigned) — succinyl-CoA--3-ketoacid CoA transferase subunit A scoA scoB (family_assigned) — succinyl-CoA--3-ketoacid CoA transferase subunit B scoB accA1 (family_assigned) — acetyl/propionyl/methylcrotonyl-CoA carboxylase su accA1 fadB (requalified) — fatty oxidation protein FadB fadB accD1 (family_assigned) — acetyl-/propionyl-CoA carboxylase subunit beta accD1 fadA6 (requalified) — acetyl-CoA C-acetyltransferase fadA6 fadA4 (requalified) — acetyl-CoA acetyltransferase fadA4 Rv3552 (family_assigned) — CoA-transferase subunit beta Rv3552 fadA3 (requalified) — acetyl-CoA C-acetyltransferase fadA3 fadA (requalified) — acetyl-CoA C-acetyltransferase fadA Rv0914c (requalified) — acetyl-CoA acetyltransferase Rv0914c fadA5 (requalified) — steroid 3-ketoacyl-CoA thiolase fadA5 fadA2 (requalified) — acetyl-CoA C-acetyltransferase fadA2 Rv3551 (family_assigned) — CoA transferase subunit A Rv3551 accD3 (family_assigned) — carboxyl transferase domain-containing protein accD3 accD5 (family_assigned) — acyl-CoA carboxylase subunit beta accD5 accD6 (family_assigned) — acyl-CoA carboxylase subunit beta accD6 fas (requalified) — fatty acid synthase fas citE (family_assigned) — citrate (pro-3S)-lyase subunit beta citE Rv1867 (requalified) — acetyl-CoA acetyltransferase Rv1867 ltp3 (family_assigned) — thiolase domain-containing protein ltp3 Rv2499c (family_assigned) — MaoC family dehydratase Rv2499c fadE19 (family_assigned) — acyl-CoA dehydrogenase family protein fadE19 fadE13 (family_assigned) — acyl-CoA dehydrogenase family protein fadE13 fadB2 (requalified) — 3-hydroxybutyryl-CoA dehydrogenase FadB2 fadB2 fadB3 (requalified) — 3-hydroxybutyryl-CoA dehydrogenase FadB fadB3 acs (requalified) — acetate--CoA ligase acs glcB (requalified) — malate synthase G glcB leuA (requalified) — 2-isopropylmalate synthase leuA echA20 (family_assigned) — enoyl-CoA hydratase family protein echA20 Rv3549c (family_assigned) — SDR family oxidoreductase Rv3549c Rv3553 (requalified) — nitronate monooxygenase Rv3553 Rv3548c (family_assigned) — SDR family oxidoreductase Rv3548c Rv3559c (family_assigned) — SDR family oxidoreductase Rv3559c Rv0913c (family_assigned) — carotenoid oxygenase family protein Rv0913c fadE29 (requalified) — acyl-CoA dehydrogenase FadE29 fadE29 chsH2 (family_assigned) — 3-oxo-23%2C24-bisnorchol-4%2C17(20)-dien-22-oyl-Co chsH2 fadE28 (requalified) — acyl-CoA dehydrogenase FadE28 fadE28 htdX (requalified) — 3-hydroxyacyl-thioester dehydratase HtdX htdX fabG4 (requalified) — 3-oxoacyl-ACP reductase fabG4

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.