MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv2494 · 45 genes shown · anchor vapB38 · open gene page → · ← back to 1 hop

Evidence: Min score 0
vapC38 (family_assigned) — type II toxin-antitoxin system VapC family toxin vapC38 vapB38 (requalified) — antitoxin vapB38 Rv2492 (requalified) — hypothetical protein Rv2492 Rv2491 (family_assigned) — TIGR00725 family protein Rv2491 Rv2018 (family_assigned) — DUF433 domain-containing protein Rv2018 vapC32 (family_assigned) — type II toxin-antitoxin system VapC family toxin vapC32 vapC13 (family_assigned) — type II toxin-antitoxin system VapC family toxin vapC13 mrr (requalified) — restriction endonuclease mrr Rv2954c (requalified) — [2%2C4-di-O-methyl-alpha-L-fucopyranosyl-(1->3)-al Rv2954c vapB31 (family_assigned) — ribbon-helix-helix protein%2C CopG family vapB31 vapB43 (family_assigned) — ribbon-helix-helix domain-containing protein vapB43 vapB32 (family_assigned) — type II toxin-antitoxin system VapB family antitox vapB32 vapC22 (family_assigned) — PIN domain-containing protein vapC22 vapB44 (family_assigned) — CopG family transcriptional regulator vapB44 vapB19 (family_assigned) — CopG family transcriptional regulator vapB19 mazE4 (requalified) — type II toxin-antitoxin system antitoxin MazE4 mazE4 moaA1 (requalified) — cyclic pyranopterin monophosphate synthase moaA1 Rv3114 (requalified) — nucleoside deaminase Rv3114 dfrA (requalified) — dihydrofolate reductase dfrA fmu (requalified) — 16S rRNA m5C967 methyltransferase fmu rnhB (requalified) — ribonuclease HII rnhB nrdZ (requalified) — adenosylcobalamin-dependent ribonucleoside-diphosp nrdZ nrdE (family_assigned) — ribonucleoside-diphosphate reductase subunit alpha nrdE nrdF2 (family_assigned) — ribonucleoside-diphosphate reductase subunit beta nrdF2 Rv2019 (family_assigned) — hypothetical protein Rv2019 Rv3181c (family_assigned) — type II toxin-antitoxin system Phd/YefM family ant Rv3181c vapC26 (requalified) — type II toxin-antitoxin system toxin ribonuclease vapC26 vapC9 (family_assigned) — type II toxin-antitoxin system VapC family toxin vapC9 vapC16 (requalified) — ribonuclease VapC16 vapC16 vapC29 (requalified) — type II toxin-antitoxin system ribonuclease VapC29 vapC29 ychF (requalified) — redox-regulated ATPase YchF ychF Rv1115 (family_assigned) — hypothetical protein Rv1115 Rv1111c (family_assigned) — DUF6542 domain-containing protein Rv1111c vapB2 (requalified) — type II toxin-antitoxin system antitoxin VapB2 vapB2 vapB13 (requalified) — antitoxin vapB13 PE_PGRS34 (family_assigned) — PE-PGRS family protein PE_PGRS34 PE_PGRS34 Rv2209 (requalified) — MFS transporter Rv2209 PPE8 (family_assigned) — PPE family protein PPE8 PPE8 PPE56 (family_assigned) — PPE family protein PPE56 PPE56 PPE55 (family_assigned) — PPE family protein PPE55 PPE55 hsdM (requalified) — class I SAM-dependent DNA methyltransferase hsdM Rv2529 (family_assigned) — hypothetical protein Rv2529 hsdS (family_assigned) — restriction endonuclease subunit S hsdS Rv1048c (dark) — hypothetical protein Rv1048c iniB (requalified) — isoniazid-induced protein IniB iniB

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.