MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv2493 · 45 genes shown · anchor vapC38 · open gene page → · ← back to 1 hop

Evidence: Min score 0
vapB38 (requalified) — antitoxin vapB38 vapC38 (family_assigned) — type II toxin-antitoxin system VapC family toxin vapC38 Rv2492 (requalified) — hypothetical protein Rv2492 Rv2491 (family_assigned) — TIGR00725 family protein Rv2491 vapB44 (family_assigned) — CopG family transcriptional regulator vapB44 vapB19 (family_assigned) — CopG family transcriptional regulator vapB19 mazE4 (requalified) — type II toxin-antitoxin system antitoxin MazE4 mazE4 vapB20 (requalified) — type II toxin-antitoxin system antitoxin VapB20 vapB20 vapB15 (requalified) — antitoxin VapB15 vapB15 mazE7 (requalified) — antitoxin MazE7 mazE7 relB (family_assigned) — type II toxin-antitoxin system Phd/YefM family ant relB vapC20 (requalified) — type II toxin-antitoxin system toxin 23S rRNA-spec vapC20 vapB18 (family_assigned) — type II toxin-antitoxin system VapB family antitox vapB18 Rv2018 (family_assigned) — DUF433 domain-containing protein Rv2018 vapC32 (family_assigned) — type II toxin-antitoxin system VapC family toxin vapC32 vapC13 (family_assigned) — type II toxin-antitoxin system VapC family toxin vapC13 moaA1 (requalified) — cyclic pyranopterin monophosphate synthase moaA1 Rv3114 (requalified) — nucleoside deaminase Rv3114 dfrA (requalified) — dihydrofolate reductase dfrA fmu (requalified) — 16S rRNA m5C967 methyltransferase fmu rnhB (requalified) — ribonuclease HII rnhB nrdZ (requalified) — adenosylcobalamin-dependent ribonucleoside-diphosp nrdZ nrdE (family_assigned) — ribonucleoside-diphosphate reductase subunit alpha nrdE nrdF2 (family_assigned) — ribonucleoside-diphosphate reductase subunit beta nrdF2 vapC44 (family_assigned) — type II toxin-antitoxin system VapC family toxin vapC44 moaX (requalified) — MoaD-MoaE fusion protein MoaX moaX Rv3322c (requalified) — methyltransferase Rv3322c moaC3 (requalified) — cyclic pyranopterin monophosphate synthase MoaC moaC3 vapC19 (family_assigned) — type II toxin-antitoxin system VapC family toxin vapC19 vapC18 (family_assigned) — PIN domain nuclease vapC18 lppB (family_assigned) — LppA family lipoprotein lppB lppA (family_assigned) — LppA family lipoprotein lppA mazF4 (requalified) — type II toxin-antitoxin system toxin endoribonucle mazF4 meaB (requalified) — methylmalonyl Co-A mutase-associated GTPase MeaB meaB mutB (requalified) — methylmalonyl-CoA mutase mutB mutA (family_assigned) — methylmalonyl-CoA mutase small subunit mutA lipL (family_assigned) — serine hydrolase domain-containing protein lipL Rv1491c (family_assigned) — TVP38/TMEM64 family protein Rv1491c Rv2548A (dark) — hypothetical protein Rv2548A Rv3378c (requalified) — diterpene synthase Rv3378c vapC15 (family_assigned) — PIN domain nuclease vapC15 vapC11 (requalified) — type II toxin-antitoxin system toxin ribonuclease vapC11 Rv2008c (family_assigned) — hypothetical protein Rv2008c vapC2 (family_assigned) — PIN domain nuclease vapC2 vapC5 (family_assigned) — type II toxin-antitoxin system VapC family toxin vapC5

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.