MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv2487c · 45 genes shown · open gene page → · ← back to 1 hop

Evidence: Min score 0
PE_PGRS42 (family_assigned) — PE-PGRS family protein PE_PGRS42 PE_PGRS42 Rv2305 (family_assigned) — hypothetical protein Rv2305 Rv3091 (family_assigned) — patatin-like phospholipase family protein Rv3091 Rv2082 (dark) — DUF5631 domain-containing protein Rv2082 Rv1060 (family_assigned) — SRPBCC family protein Rv1060 Rv3435c (family_assigned) — DUF4436 domain-containing protein Rv3435c Rv2488c (family_assigned) — LuxR family transcriptional regulator Rv2488c iniB (requalified) — isoniazid-induced protein IniB iniB PPE55 (family_assigned) — PPE family protein PPE55 PPE55 PPE56 (family_assigned) — PPE family protein PPE56 PPE56 PPE34 (family_assigned) — PPE family protein PPE34 PPE34 PPE8 (family_assigned) — PPE family protein PPE8 PPE8 PPE54 (family_assigned) — PPE family protein PPE54 PPE54 Rv2306A (family_assigned) — Possible conserved membrane protein Rv2306A PE_PGRS43 (family_assigned) — PE-PGRS family protein PE_PGRS43 PE_PGRS43 Rv2306B (family_assigned) — Possible conserved membrane protein Rv2306B Rv3090 (family_assigned) — SPFH domain-containing protein Rv3090 Rv1157c (dark) — hypothetical protein Rv1157c PE_PGRS16 (family_assigned) — PE-PGRS family protein PE_PGRS16 PE_PGRS16 Rv2086 (family_assigned) — hypothetical protein Rv2086 eccD4 (family_assigned) — type VII secretion system ESX-4 subunit EccD4 eccD4 Rv2083 (dark) — hypothetical protein Rv2083 Rv2084 (dark) — hypothetical protein Rv2084 Rv1061 (requalified) — class II glutamine amidotransferase Rv1061 Rv1062 (family_assigned) — patatin-like phospholipase family protein Rv1062 Rv1059 (requalified) — dihydrodipicolinate reductase Rv1059 fadD14 (requalified) — long-chain fatty acid--CoA ligase fadD14 Rv3899c (family_assigned) — hypothetical protein Rv3899c Rv3434c (family_assigned) — rhomboid-like protein Rv3434c Rv3433c (requalified) — NAD(P)H-hydrate dehydratase Rv3433c Rv2423 (requalified) — class I SAM-dependent methyltransferase Rv2423 Rv3166c (family_assigned) — DUF4129 domain-containing protein Rv3166c Rv3843c (family_assigned) — DUF4328 domain-containing protein Rv3843c Rv2067c (requalified) — class I SAM-dependent methyltransferase Rv2067c cmr (family_assigned) — HTH-type transcriptional regulator Cmr cmr embR (requalified) — response regulator transcription factor EmbR embR kdpE (requalified) — two-component system response regulator KdpE kdpE Rv1931c (family_assigned) — transcriptional regulator Rv1931c sigI (requalified) — RNA polymerase sigma factor SigI sigI Rv1359 (family_assigned) — transcriptional regulator Rv1359 iniA (requalified) — isoniazid inductible protein IniA iniA iniC (requalified) — isoniazid-induced dynamin-like GTPase IniC iniC Rv2954c (requalified) — [2%2C4-di-O-methyl-alpha-L-fucopyranosyl-(1->3)-al Rv2954c Rv2209 (requalified) — MFS transporter Rv2209 cpnT (requalified) — outer membrane channel protein/necrotizing toxin g cpnT

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.