MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv2476c · 46 genes shown · open gene page → · ← back to 1 hop

Evidence: Min score 0
gdh (requalified) — NAD-glutamate dehydrogenase gdh Rv2475c (family_assigned) — thioesterase family protein Rv2475c rocA (requalified) — L-glutamate gamma-semialdehyde dehydrogenase rocA garA (requalified) — glycogen accumulation regulator GarA garA aspC (requalified) — pyridoxal phosphate-dependent aminotransferase aspC gltD (family_assigned) — glutamate synthase subunit beta gltD glnA1 (requalified) — type I glutamate--ammonia ligase glnA1 purQ (family_assigned) — phosphoribosylformylglycinamidine synthase subunit purQ nirB (family_assigned) — nitrite reductase large subunit NirB nirB gltB (family_assigned) — glutamate synthase large subunit gltB glnA4 (family_assigned) — glutamine synthetase family protein glnA4 glnA2 (family_assigned) — glutamine synthetase family protein glnA2 argJ (requalified) — bifunctional glutamate N-acetyltransferase/amino-a argJ mas (requalified) — mycocerosate synthase mas ppsC (requalified) — phthiocerol type I polyketide synthase PpsC ppsC pks12 (requalified) — type I polyketide synthase pks12 pks2 (requalified) — phthioceranic/hydroxyphthioceranic acid synthase pks2 pks5 (requalified) — sulfolipid-1 biosynthesis phthioceranic/hydroxypht pks5 Rv1188 (requalified) — proline dehydrogenase Rv1188 rocD1 (family_assigned) — Probable ornithine aminotransferase (N-terminus pa rocD1 gadB (requalified) — glutamate decarboxylase gadB Rv1248c (family_assigned) — multifunctional oxoglutarate decarboxylase/oxoglut Rv1248c pknB (family_assigned) — Stk1 family PASTA domain-containing Ser/Thr kinase pknB Rv1828 (family_assigned) — MerR family transcriptional regulator Rv1828 pknG (requalified) — serine/threonine protein kinase PknG pknG Rv1829 (family_assigned) — hypothetical protein Rv1829 ilvD (requalified) — dihydroxy-acid dehydratase ilvD leuA (requalified) — 2-isopropylmalate synthase leuA ilvE (requalified) — branched-chain amino acid aminotransferase ilvE ald (requalified) — alanine dehydrogenase ald Rv1937 (requalified) — FAD-binding oxidoreductase Rv1937 glnA3 (family_assigned) — glutamine synthetase family protein glnA3 glmS (requalified) — glutamine--fructose-6-phosphate transaminase (isom glmS carA (family_assigned) — glutamine-hydrolyzing carbamoyl-phosphate synthase carA carB (family_assigned) — carbamoyl-phosphate synthase large subunit carB Rv0787A (family_assigned) — hypothetical protein Rv0787A purL (family_assigned) — phosphoribosylformylglycinamidine synthase subunit purL purM (requalified) — phosphoribosylformylglycinamidine cyclo-ligase purM purF (requalified) — amidophosphoribosyltransferase purF purN (requalified) — phosphoribosylglycinamide formyltransferase purN purD (requalified) — phosphoribosylamine--glycine ligase purD nirD (family_assigned) — nitrite reductase small subunit NirD nirD narG (family_assigned) — nitrate reductase subunit alpha narG narX (family_assigned) — respiratory nitrate reductase subunit gamma narX narU (family_assigned) — NarK family nitrate/nitrite MFS transporter narU narK3 (requalified) — nitrate/nitrite transporter narK3

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.