MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv2475c · 42 genes shown · anchor gdh · open gene page → · ← back to 1 hop

Evidence: Min score 0
Rv2475c (family_assigned) — thioesterase family protein Rv2475c gdh (requalified) — NAD-glutamate dehydrogenase gdh mas (requalified) — mycocerosate synthase mas ppsC (requalified) — phthiocerol type I polyketide synthase PpsC ppsC pks12 (requalified) — type I polyketide synthase pks12 pks2 (requalified) — phthioceranic/hydroxyphthioceranic acid synthase pks2 pks5 (requalified) — sulfolipid-1 biosynthesis phthioceranic/hydroxypht pks5 Rv2474c (family_assigned) — hypothetical protein Rv2474c pks1 (requalified) — polyketide synthase pks1 ppsB (requalified) — phthiocerol type I polyketide synthase PpsB ppsB ettA (requalified) — energy-dependent translational throttle protein Et ettA pks7 (requalified) — type I polyketide synthase pks7 pks4 (requalified) — polyketide beta-ketoacyl synthase pks4 rocA (requalified) — L-glutamate gamma-semialdehyde dehydrogenase rocA garA (requalified) — glycogen accumulation regulator GarA garA aspC (requalified) — pyridoxal phosphate-dependent aminotransferase aspC gltD (family_assigned) — glutamate synthase subunit beta gltD glnA1 (requalified) — type I glutamate--ammonia ligase glnA1 fas (requalified) — fatty acid synthase fas fabD (requalified) — malonyl CoA-acyl carrier protein transacylase fabD mbtB (requalified) — phenyloxazoline synthase MbtB mbtB ppsE (requalified) — phthiocerol type I polyketide synthase PpsE ppsE ppsD (requalified) — phthiocerol type I polyketide synthase PpsD ppsD papA1 (requalified) — acyltransferase PapA1 papA1 Rv3438 (family_assigned) — alpha/beta hydrolase Rv3438 Rv2446c (dark) — DUF4233 domain-containing protein Rv2446c Rv0358 (requalified) — peptidase M50 Rv0358 pks15 (requalified) — polyketide synthase pks15 mbtC (requalified) — polyketide synthetase MbtC mbtC ppsA (requalified) — phthiocerol type I polyketide synthase PpsA ppsA fadD26 (requalified) — long-chain-fatty-acid--AMP ligase FAAL26/FadD26 fadD26 rplU (requalified) — 50S ribosomal protein L21 rplU rplM (requalified) — 50S ribosomal protein L13 rplM rpsO (requalified) — 30S ribosomal protein S15 rpsO rpsC (requalified) — 30S ribosomal protein S3 rpsC rplD (requalified) — 50S ribosomal protein L4 rplD rplR (requalified) — 50S ribosomal protein L18 rplR pks8 (requalified) — polyketide synthase pks8 pks9 (requalified) — type I polyketide synthase pks9 pks17 (requalified) — polyketide synthase pks17 pks3 (requalified) — polyketide beta-ketoacyl synthase pks3 papA3 (requalified) — acyltransferase PapA3 papA3

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.