MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv2461c · 46 genes shown · anchor clpP2 · open gene page → · ← back to 1 hop

Evidence: Min score 0
clpP1 (family_assigned) — ATP-dependent CLP protease proteolytic subunit 1 clpP1 clpP2 (family_assigned) — ATP-dependent CLP protease proteolytic subunit Clp clpP2 clpX (family_assigned) — ATP-dependent Clp protease ATP-binding subunit Clp clpX tig (requalified) — trigger factor tig clpC1 (family_assigned) — ATP-dependent protease ATP-binding subunit ClpC clpC1 clpB (requalified) — chaperone protein ClpB clpB groES (requalified) — chaperonin GroES groES clpC2 (family_assigned) — ATP-dependent protease ATP-binding subunit ClpC clpC2 def (requalified) — peptide deformylase def ptrBa (family_assigned) — Probable protease II PtrBa [first part] (oligopept ptrBa ptrBb (family_assigned) — Probable protease II PtrBb [second part] (oligopep ptrBb hrcA (requalified) — heat-inducible transcriptional repressor HrcA hrcA groEL1 (requalified) — chaperonin GroEL groEL1 Rv3716c (family_assigned) — YbaB/EbfC family nucleoid-associated protein Rv3716c Rv2456c (requalified) — MFS transporter Rv2456c mobA (requalified) — molybdenum cofactor guanylyltransferase mobA mmuM (requalified) — homocysteine S-methyltransferase mmuM ftsH (requalified) — ATP-dependent zinc metalloprotease FtsH ftsH rpsG (requalified) — 30S ribosomal protein S7 rpsG rplW (requalified) — 50S ribosomal protein L23 rplW rplC (requalified) — 50S ribosomal protein L3 rplC rplM (requalified) — 50S ribosomal protein L13 rplM rpsB (requalified) — 30S ribosomal protein S2 rpsB rplB (requalified) — 50S ribosomal protein L2 rplB clpS (requalified) — ATP-dependent Clp protease adapter ClpS clpS dnaK (requalified) — molecular chaperone DnaK dnaK Rv0312 (family_assigned) — Hsp70 family protein Rv0312 Rv3446c (family_assigned) — type VII secretion-associated protein Rv3446c grpE (requalified) — nucleotide exchange factor GrpE grpE Rv2264c (family_assigned) — Hsp70 family protein Rv2264c groEL2 (requalified) — chaperonin GroEL groEL2 htpG (requalified) — molecular chaperone HtpG htpG Rv2668 (family_assigned) — hypothetical protein Rv2668 rplU (requalified) — 50S ribosomal protein L21 rplU rplV (requalified) — 50S ribosomal protein L22 rplV rplI (requalified) — 50S ribosomal protein L9 rplI rplQ (requalified) — 50S ribosomal protein L17 rplQ rplD (requalified) — 50S ribosomal protein L4 rplD purC (requalified) — phosphoribosylaminoimidazolesuccinocarboxamide syn purC Rv0457c (family_assigned) — prolyl oligopeptidase family protein Rv0457c Rv0779c (dark) — hypothetical protein Rv0779c Rv1732c (family_assigned) — thioredoxin family protein Rv1732c dnaJ2 (requalified) — molecular chaperone DnaJ dnaJ2 Rv2372c (requalified) — 16S rRNA (uracil(1498)-N(3))-methyltransferase Rv2372c Rv2375 (family_assigned) — type II toxin-antitoxin system VapB family antitox Rv2375 dnaJ1 (requalified) — chaperone protein DnaJ dnaJ1

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.