MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv2457c · 46 genes shown · anchor clpP1 · open gene page → · ← back to 1 hop

Evidence: Min score 0
clpX (family_assigned) — ATP-dependent Clp protease ATP-binding subunit Clp clpX clpP1 (family_assigned) — ATP-dependent CLP protease proteolytic subunit 1 clpP1 clpP2 (family_assigned) — ATP-dependent CLP protease proteolytic subunit Clp clpP2 Rv2456c (requalified) — MFS transporter Rv2456c mobA (requalified) — molybdenum cofactor guanylyltransferase mobA mmuM (requalified) — homocysteine S-methyltransferase mmuM ftsH (requalified) — ATP-dependent zinc metalloprotease FtsH ftsH atpD (family_assigned) — F0F1 ATP synthase subunit beta atpD Rv2455c (family_assigned) — 2-oxoacid:acceptor oxidoreductase subunit alpha Rv2455c rpsA (requalified) — 30S ribosomal protein S1 rpsA phoH1 (requalified) — phosphate starvation-inducible protein PhoH phoH1 infC (requalified) — translation initiation factor IF-3 infC Rv2454c (family_assigned) — 2-oxoacid:ferredoxin oxidoreductase subunit beta Rv2454c tig (requalified) — trigger factor tig clpC1 (family_assigned) — ATP-dependent protease ATP-binding subunit ClpC clpC1 clpB (requalified) — chaperone protein ClpB clpB groES (requalified) — chaperonin GroES groES Rv3716c (family_assigned) — YbaB/EbfC family nucleoid-associated protein Rv3716c cdh (requalified) — CDP-diacylglycerol diphosphatase cdh moeA2 (requalified) — molybdopterin molybdenumtransferase moeA2 moeA1 (requalified) — molybdopterin molybdenumtransferase 1 moeA1 Rv0371c (family_assigned) — NTP transferase domain-containing protein Rv0371c Rv0345 (family_assigned) — hypothetical protein Rv0345 metZ (requalified) — O-succinylhomoserine sulfhydrylase metZ metB (requalified) — cystathionine gamma-synthase metB metH (requalified) — methionine synthase metH metE (requalified) — 5-methyltetrahydropteroyltriglutamate--homocystein metE metC (requalified) — bifunctional o-acetylhomoserine/o-acetylserine sul metC metK (requalified) — S-adenosylmethionine synthetase metK folE (requalified) — GTP cyclohydrolase I FolE folE folB (requalified) — dihydroneopterin aldolase folB Rv1488 (family_assigned) — SPFH domain-containing protein Rv1488 Rv3090 (family_assigned) — SPFH domain-containing protein Rv3090 folP1 (requalified) — dihydropteroate synthase folP1 rplS (requalified) — 50S ribosomal protein L19 rplS atpF (family_assigned) — F0F1 ATP synthase subunit B atpF atpA (family_assigned) — F0F1 ATP synthase subunit alpha atpA atpG (family_assigned) — F0F1 ATP synthase subunit gamma atpG atpB (family_assigned) — F0F1 ATP synthase subunit A atpB atpH (family_assigned) — F0F1 ATP synthase subunit B/delta atpH atpC (family_assigned) — F0F1 ATP synthase subunit epsilon atpC icd2 (requalified) — NADP-dependent isocitrate dehydrogenase icd2 aroF (requalified) — chorismate synthase aroF pta (requalified) — phosphate acetyltransferase pta sucD (family_assigned) — succinyl-CoA ligase subunit alpha sucD sucC (family_assigned) — ADP-forming succinate--CoA ligase subunit beta sucC

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.