MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv2429 · 45 genes shown · anchor ahpC · open gene page → · ← back to 1 hop

Evidence: Min score 0
ahpD (requalified) — alkyl hydroperoxide reductase ahpD ahpC (requalified) — peroxiredoxin AhpC ahpC cysC (requalified) — adenylyl-sulfate kinase cysC Rv1874 (family_assigned) — hypothetical protein Rv1874 Rv0477 (dark) — DUF2599 domain-containing protein Rv0477 cysT (family_assigned) — sulfate ABC transporter permease subunit CysT cysT Rv0433 (requalified) — glutamate--cysteine ligase Rv0433 sirA (requalified) — sulfite reductase sirA sodA (requalified) — superoxide dismutase sodA ahpE (requalified) — peroxiredoxin AhpE ahpE pheS (family_assigned) — phenylalanine--tRNA ligase subunit alpha pheS sodC (family_assigned) — superoxide dismutase family protein sodC trxB2 (requalified) — thioredoxin-disulfide reductase trxB2 dipZ (requalified) — integral membrane C-type cytochrome biogenesis pro dipZ dsbF (requalified) — protein disulfide oxidoreductase dsbF thiX (family_assigned) — thioredoxin family protein thiX Rv3673c (family_assigned) — membrane-anchored thioredoxin-like protein Rv3673c subI (family_assigned) — sulfate ABC transporter substrate-binding protein subI cysD (family_assigned) — sulfate adenylyltransferase subunit CysD cysD cysH (requalified) — phosphoadenylyl-sulfate reductase cysH cysW (family_assigned) — sulfate ABC transporter permease subunit CysW cysW cysA1 (family_assigned) — sulfate ABC transporter ATP-binding protein CysA cysA1 Rv1875 (requalified) — PPOX class F420-dependent oxidoreductase Rv1875 Rv0138 (family_assigned) — nuclear transport factor 2 family protein Rv0138 Rv2910c (family_assigned) — hypothetical protein Rv2910c Rv0293c (requalified) — alpha/beta fold hydrolase Rv0293c Rv0310c (family_assigned) — nuclear transport factor 2 family protein Rv0310c Rv3577 (requalified) — hypothetical protein Rv3577 deoC (requalified) — deoxyribose-phosphate aldolase deoC Rv0476 (requalified) — transmembrane protein Rv0476 hbhA (requalified) — heparin-binding hemagglutinin HbhA hbhA Rv0474 (family_assigned) — helix-turn-helix transcriptional regulator Rv0474 cut5b (family_assigned) — Probable cutinase [second part] Cut5b cut5b eccB3 (family_assigned) — type VII secretion system ESX-3 subunit EccB3 eccB3 modA (family_assigned) — molybdate ABC transporter substrate-binding protei modA ggtA (requalified) — bifunctional cephalosporin acylase/gamma-glutamylt ggtA ggtB (family_assigned) — gamma-glutamyltransferase family protein ggtB gshA (requalified) — ergothioneine biosynthesis glutamate--cysteine lig gshA pepN (requalified) — aminopeptidase PepN pepN pepB (requalified) — leucyl aminopeptidase pepB che1 (requalified) — ferrochelatase che1 cysK1 (requalified) — O-acetylserine sulfhydrylase cysK1 Rv3684 (requalified) — lyase Rv3684 metB (requalified) — cystathionine gamma-synthase metB rplQ (requalified) — 50S ribosomal protein L17 rplQ

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.