MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv2427c · 46 genes shown · anchor proB · open gene page → · ← back to 1 hop

Evidence: Min score 0
proA (requalified) — glutamate-5-semialdehyde dehydrogenase proA proB (requalified) — glutamate 5-kinase proB rocA (requalified) — L-glutamate gamma-semialdehyde dehydrogenase rocA purQ (family_assigned) — phosphoribosylformylglycinamidine synthase subunit purQ atpA (family_assigned) — F0F1 ATP synthase subunit alpha atpA Rv2426c (family_assigned) — MoxR family ATPase Rv2426c gadB (requalified) — glutamate decarboxylase gadB Rv2425c (family_assigned) — VWA domain-containing protein Rv2425c gltB (family_assigned) — glutamate synthase large subunit gltB glnA4 (family_assigned) — glutamine synthetase family protein glnA4 glnA2 (family_assigned) — glutamine synthetase family protein glnA2 gltD (family_assigned) — glutamate synthase subunit beta gltD glnA1 (requalified) — type I glutamate--ammonia ligase glnA1 rocD1 (family_assigned) — Probable ornithine aminotransferase (N-terminus pa rocD1 obg (requalified) — GTPase ObgE obg proC (requalified) — pyrroline-5-carboxylate reductase proC rpmA (requalified) — 50S ribosomal protein L27 rpmA Rv1188 (requalified) — proline dehydrogenase Rv1188 gdh (requalified) — NAD-glutamate dehydrogenase gdh Rv0787A (family_assigned) — hypothetical protein Rv0787A purL (family_assigned) — phosphoribosylformylglycinamidine synthase subunit purL purM (requalified) — phosphoribosylformylglycinamidine cyclo-ligase purM purF (requalified) — amidophosphoribosyltransferase purF purN (requalified) — phosphoribosylglycinamide formyltransferase purN purD (requalified) — phosphoribosylamine--glycine ligase purD atpH (family_assigned) — F0F1 ATP synthase subunit B/delta atpH atpB (family_assigned) — F0F1 ATP synthase subunit A atpB atpE (family_assigned) — F0F1 ATP synthase subunit C atpE atpC (family_assigned) — F0F1 ATP synthase subunit epsilon atpC atpF (family_assigned) — F0F1 ATP synthase subunit B atpF atpD (family_assigned) — F0F1 ATP synthase subunit beta atpD Rv0368c (family_assigned) — VWA domain-containing protein Rv0368c Rv0373c (family_assigned) — aerobic carbon-monoxide dehydrogenase large subuni Rv0373c rsfS (requalified) — ribosome silencing factor rsfS Rv2424c (requalified) — transposase Rv2424c panC (requalified) — pantoate--beta-alanine ligase panC gabT (requalified) — 4-aminobutyrate--2-oxoglutarate transaminase gabT Rv0147 (requalified) — aldehyde dehydrogenase Rv0147 pcd (requalified) — piperideine-6-carboxylic acid dehydrogenase pcd Rv0223c (requalified) — aldehyde dehydrogenase Rv0223c Rv0370c (family_assigned) — MoxR family ATPase Rv0370c Rv2417c (family_assigned) — DegV family protein Rv2417c mftF (requalified) — mycofactocin biosynthesis glycosyltransferase MftF mftF fprA (requalified) — ferredoxin--NADP(+) reductase FprA fprA fadH (requalified) — NADPH-dependent 2%2C4-dienoyl-CoA reductase fadH fprB (requalified) — FAD-dependent oxidoreductase fprB

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.