MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv2424c · 32 genes shown · open gene page → · ← back to 1 hop

Evidence: Min score 0
Rv2424c (requalified) — transposase Rv2424c Rv2177c (requalified) — transposase Rv2177c Rv0071 (family_assigned) — reverse transcriptase domain-containing protein Rv0071 Rv2426c (family_assigned) — MoxR family ATPase Rv2426c Rv2425c (family_assigned) — VWA domain-containing protein Rv2425c proA (requalified) — glutamate-5-semialdehyde dehydrogenase proA Rv3428c (requalified) — transposase Rv3428c rsmD (requalified) — 16S rRNA (guanine(966)-N(2))-methyltransferase Rsm rsmD aroG (requalified) — 3-deoxy-7-phosphoheptulonate synthase class II aroG cas2 (requalified) — CRISPR-associated endonuclease Cas2 cas2 istB (family_assigned) — IS21-like element ISMt2 family helper ATPase IstB istB Rv2944 (requalified) — insertion sequence element IS1533 transposase Rv2944 Rv0368c (family_assigned) — VWA domain-containing protein Rv0368c Rv0373c (family_assigned) — aerobic carbon-monoxide dehydrogenase large subuni Rv0373c rsfS (requalified) — ribosome silencing factor rsfS Rv0370c (family_assigned) — MoxR family ATPase Rv0370c Rv2417c (family_assigned) — DegV family protein Rv2417c mftF (requalified) — mycofactocin biosynthesis glycosyltransferase MftF mftF proB (requalified) — glutamate 5-kinase proB rocA (requalified) — L-glutamate gamma-semialdehyde dehydrogenase rocA purQ (family_assigned) — phosphoribosylformylglycinamidine synthase subunit purQ atpA (family_assigned) — F0F1 ATP synthase subunit alpha atpA gadB (requalified) — glutamate decarboxylase gadB Rv3638 (family_assigned) — ATP-binding protein Rv3638 Rv2943A (requalified) — transposase Rv2943A Rv2943 (requalified) — insertion sequence element IS1533 transposase Rv2943 kdtB (requalified) — pantetheine-phosphate adenylyltransferase kdtB pca (requalified) — pyruvate carboxylase pca yidD (requalified) — membrane protein insertion efficiency factor YidD yidD Rv2968c (family_assigned) — vitamin K epoxide reductase family protein Rv2968c Rv2969c (requalified) — mycothiol-dependent reductase Rv2969c lipN (requalified) — lipase/esterase LipN lipN

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.