MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv2422 · 46 genes shown · anchor gpgP · open gene page → · ← back to 1 hop

Evidence: Min score 0
Rv2422 (family_assigned) — hypothetical protein Rv2422 gpgP (requalified) — glucosyl-3-phosphoglycerate phosphatase gpgP galK (requalified) — galactokinase galK nadD (requalified) — nicotinate-nucleotide adenylyltransferase nadD octT (requalified) — diglucosylglycerate octanoyltransferase octT rsfS (requalified) — ribosome silencing factor rsfS Rv2423 (requalified) — class I SAM-dependent methyltransferase Rv2423 Rv0449c (requalified) — NAD(P)/FAD-dependent oxidoreductase Rv0449c Rv3160c (family_assigned) — helix-turn-helix domain-containing protein Rv3160c secA1 (family_assigned) — protein translocase subunit SecA secA1 blaC (requalified) — beta-lactamase blaC Rv2417c (family_assigned) — DegV family protein Rv2417c Rv2135c (family_assigned) — histidine phosphatase family protein Rv2135c gpgS (requalified) — glucosyl-3-phosphoglycerate synthase gpgS galTa (family_assigned) — Probable galactose-1-phosphate uridylyltransferase galTa galTb (family_assigned) — Probable galactose-1-phosphate uridylyltransferase galTb Rv1752 (family_assigned) — hypothetical protein Rv1752 Rv0648 (requalified) — alpha-mannosidase Rv0648 Rv0745 (family_assigned) — hypothetical protein Rv0745 bglS (requalified) — beta-glucosidase BglS bglS cinA (requalified) — competence/damage-inducible protein A cinA nadE (requalified) — NAD(+) synthase nadE ppnK (requalified) — NAD kinase ppnK cobB (requalified) — NAD-dependent protein deacylase cobB Rv2186c (requalified) — polyketide cyclase / dehydrase and lipid transport Rv2186c Rv2695 (requalified) — alpha/beta fold hydrolase Rv2695 rplN (requalified) — 50S ribosomal protein L14 rplN rplU (requalified) — 50S ribosomal protein L21 rplU rplS (requalified) — 50S ribosomal protein L19 rplS rplQ (requalified) — 50S ribosomal protein L17 rplQ rpmA (requalified) — 50S ribosomal protein L27 rpmA cobIJ (requalified) — precorrin-2 C(20)-methyltransferase cobIJ Rv2067c (requalified) — class I SAM-dependent methyltransferase Rv2067c Rv3899c (family_assigned) — hypothetical protein Rv3899c Rv3435c (family_assigned) — DUF4436 domain-containing protein Rv3435c Rv3166c (family_assigned) — DUF4129 domain-containing protein Rv3166c Rv2079 (family_assigned) — alpha/beta hydrolase Rv2079 ufaA1 (requalified) — class I SAM-dependent methyltransferase ufaA1 Rv0446c (family_assigned) — DUF1295 domain-containing protein Rv0446c Rv0448c (dark) — hypothetical protein Rv0448c cmaA1 (requalified) — cyclopropane mycolic acid synthase CmaA1 cmaA1 sigK (family_assigned) — sigma-70 family RNA polymerase sigma factor SigK sigK mmpL4 (requalified) — transmembrane transport protein MmpL4 mmpL4 mmpL5 (requalified) — siderophore RND transporter MmpL5 mmpL5 mmpR5 (family_assigned) — siderophore transport transcriptional regulator Mm mmpR5 Rv3161c (family_assigned) — aromatic ring-hydroxylating dioxygenase subunit al Rv3161c

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.