MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv2413c · 42 genes shown · open gene page → · ← back to 1 hop

Evidence: Min score 0
Rv2413c (family_assigned) — DNA polymerase III subunit delta Rv2413c Rv3644c (family_assigned) — DNA polymerase III subunit delta' Rv3644c dnaN (family_assigned) — DNA polymerase III subunit beta dnaN dnaZX (family_assigned) — DNA polymerase III subunits gamma/tau dnaZX dnaE1 (family_assigned) — DNA polymerase III subunit alpha dnaE1 Rv2191 (family_assigned) — hypothetical protein Rv2191 dnaQ (family_assigned) — DEDDh family exonuclease dnaQ Rv2414c (family_assigned) — ComEC/Rec2 family competence protein Rv2414c dnaE2 (requalified) — error-prone DNA polymerase dnaE2 lppK (family_assigned) — hypothetical protein lppK Rv2415c (family_assigned) — ComEA family DNA-binding protein Rv2415c rbpA (family_assigned) — RNA polymerase-binding protein RbpA rbpA Rv2708c (family_assigned) — hypothetical protein Rv2708c polA (requalified) — DNA polymerase I polA dnaA (requalified) — chromosomal replication initiator protein DnaA dnaA uvrB (family_assigned) — excinuclease ABC subunit UvrB uvrB Rv2897c (family_assigned) — YifB family Mg chelatase-like AAA ATPase Rv2897c Rv1364c (family_assigned) — sigma factor regulatory protein Rv1364c dprA (requalified) — DNA-processing protein DprA dprA Rv3242c (family_assigned) — ComF family protein Rv3242c Rv3394c (family_assigned) — DNA polymerase Y family protein Rv3394c Rv3395c (family_assigned) — hypothetical protein Rv3395c ssb (family_assigned) — single-stranded DNA-binding protein ssb Rv2478c (family_assigned) — hypothetical protein Rv2478c Rv2090 (requalified) — 5'-3' exonuclease Rv2090 helZ (requalified) — DEAD/DEAH box helicase helZ ligC (requalified) — ATP-dependent DNA ligase ligC ligB (requalified) — ATP-dependent DNA ligase ligB eis (requalified) — enhanced intracellular survival protein eis erm(37) (requalified) — 23S rRNA (adenine(2058)-N(6))-methyltransferase Er erm(37) Rv1257c (family_assigned) — FAD-linked oxidase C-terminal domain-containing pr Rv1257c Rv2551c (family_assigned) — A24 family peptidase Rv2551c rpoA (family_assigned) — DNA-directed RNA polymerase subunit alpha rpoA rpoZ (family_assigned) — DNA-directed RNA polymerase subunit omega rpoZ sigA (requalified) — RNA polymerase sigma factor sigA rpoC (family_assigned) — DNA-directed RNA polymerase subunit beta' rpoC rpoB (family_assigned) — DNA-directed RNA polymerase subunit beta rpoB sigB (family_assigned) — sigma-70 family RNA polymerase sigma factor SigB sigB Rv2709 (dark) — DUF3099 domain-containing protein Rv2709 Rv2219 (family_assigned) — DUF4191 domain-containing protein Rv2219 Rv2699c (dark) — DUF4193 domain-containing protein Rv2699c Rv2731 (family_assigned) — DUF349 domain-containing protein Rv2731

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.