MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv2408 · 46 genes shown · open gene page → · ← back to 1 hop

Evidence: Min score 0
PE24 (family_assigned) — PE family protein PE24 PE24 PPE31 (family_assigned) — PPE family protein PPE31 PPE31 PE_PGRS40 (family_assigned) — PE-PGRS family protein PE_PGRS40 PE_PGRS40 rplU (requalified) — 50S ribosomal protein L21 rplU PPE13 (family_assigned) — PPE family protein PPE13 PPE13 metZ (requalified) — O-succinylhomoserine sulfhydrylase metZ PPE9 (family_assigned) — PPE family protein PPE9 PPE9 rplY (requalified) — 50S ribosomal protein L25/general stress protein C rplY PPE7 (family_assigned) — PPE family protein PPE7 PPE7 Rv1146 (requalified) — transmembrane transport protein Rv1146 kmtR (requalified) — Ni(II)/Co(II)-sensing metalloregulatory transcript kmtR PE20 (family_assigned) — PE family protein PE20 PE20 Rv1805c (dark) — hypothetical protein Rv1805c PPE32 (family_assigned) — PPE family protein PPE32 PPE32 Rv2370c (family_assigned) — PucR family transcriptional regulator Rv2370c Rv2367c (requalified) — endoribonuclease Rv2367c phoH1 (requalified) — phosphate starvation-inducible protein PhoH phoH1 Rv2365c (requalified) — cytidine deaminase Rv2365c Rv2369c (dark) — hypothetical protein Rv2369c Rv2366c (family_assigned) — hemolysin family protein Rv2366c rpmG2 (requalified) — 50S ribosomal protein L33 rpmG2 rpmE (requalified) — 50S ribosomal protein L31 rpmE rpmA (requalified) — 50S ribosomal protein L27 rpmA rplR (requalified) — 50S ribosomal protein L18 rplR rplQ (requalified) — 50S ribosomal protein L17 rplQ Rv2082 (dark) — DUF5631 domain-containing protein Rv2082 PE_PGRS28 (family_assigned) — PE-PGRS family protein PE_PGRS28 PE_PGRS28 PE_PGRS2 (family_assigned) — PE-PGRS family protein PE_PGRS2 PE_PGRS2 Rv1004c (family_assigned) — hypothetical protein Rv1004c PE_PGRS15 (family_assigned) — PE-PGRS family protein PE_PGRS15 PE_PGRS15 PE_PGRS30 (family_assigned) — PE-PGRS family protein PE_PGRS30 PE_PGRS30 cbs (requalified) — cystathionine beta-synthase cbs metH (requalified) — methionine synthase metH cysK1 (requalified) — O-acetylserine sulfhydrylase cysK1 Rv3684 (requalified) — lyase Rv3684 metE (requalified) — 5-methyltetrahydropteroyltriglutamate--homocystein metE metC (requalified) — bifunctional o-acetylhomoserine/o-acetylserine sul metC Rv0387c (family_assigned) — Conserved hypothetical protein Rv0387c purT (requalified) — phosphoribosylglycinamide formyltransferase 2 purT Rv0390 (family_assigned) — rhodanese-like domain-containing protein Rv0390 rplI (requalified) — 50S ribosomal protein L9 rplI rpmD (requalified) — 50S ribosomal protein L30 rpmD rpsC (requalified) — 30S ribosomal protein S3 rpsC rplD (requalified) — 50S ribosomal protein L4 rplD PPE8 (family_assigned) — PPE family protein PPE8 PPE8 purA (requalified) — adenylosuccinate synthase purA

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.