MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv2405 · 46 genes shown · anchor lepA · open gene page → · ← back to 1 hop

Evidence: Min score 0
Rv2405 (family_assigned) — hypothetical protein Rv2405 lepA (requalified) — translation elongation factor 4 lepA lppR (family_assigned) — sensor domain-containing protein lppR mazE6 (requalified) — antitoxin MazE6 mazE6 Rv3095 (family_assigned) — helix-turn-helix domain-containing protein Rv3095 Rv1725c (family_assigned) — winged helix-turn-helix transcriptional regulator Rv1725c Rv1204c (family_assigned) — hypothetical protein Rv1204c Rv0315 (requalified) — family 16 glycosylhydrolase Rv0315 Rv1632c (family_assigned) — DUF402 domain-containing protein Rv1632c rplS (requalified) — 50S ribosomal protein L19 rplS rplM (requalified) — 50S ribosomal protein L13 rplM rpsB (requalified) — 30S ribosomal protein S2 rpsB rpsP (requalified) — 30S ribosomal protein S16 rpsP rplQ (requalified) — 50S ribosomal protein L17 rplQ rplY (requalified) — 50S ribosomal protein L25/general stress protein C rplY lpqK (family_assigned) — serine hydrolase domain-containing protein lpqK modA (family_assigned) — molybdate ABC transporter substrate-binding protei modA lpqI (requalified) — lipoprotein LpqI lpqI lpqT (requalified) — lipoprotein LpqT lpqT mazF6 (requalified) — type II toxin-antitoxin system toxin endoribonucle mazF6 mazF9 (requalified) — type II toxin-antitoxin system toxin endoribonucle mazF9 mazF1 (requalified) — toxin MazF1 mazF1 mazF7 (requalified) — mRNA interferase MazF7 mazF7 mazF3 (requalified) — type II toxin-antitoxin system toxin endoribonucle mazF3 mazF2 (family_assigned) — type II toxin-antitoxin system PemK/MazF family to mazF2 Rv3093c (requalified) — LLM class F420-dependent oxidoreductase Rv3093c Rv3094c (family_assigned) — acyl-CoA dehydrogenase family protein Rv3094c Rv3092c (family_assigned) — DUF808 domain-containing protein Rv3092c Rv3096 (requalified) — 1%2C4-beta-xylanase Rv3096 Rv1931c (family_assigned) — transcriptional regulator Rv1931c Rv1724c (dark) — hypothetical protein Rv1724c sigI (requalified) — RNA polymerase sigma factor SigI sigI Rv3055 (family_assigned) — helix-turn-helix domain-containing protein Rv3055 Rv3167c (family_assigned) — TetR/AcrR family transcriptional regulator Rv3167c sigJ (family_assigned) — sigma-70 family RNA polymerase sigma factor SigJ sigJ Rv1203c (family_assigned) — hypothetical protein Rv1203c lprB (family_assigned) — DUF3558 domain-containing protein lprB Rv1125 (family_assigned) — WS/DGAT domain-containing protein Rv1125 Rv1205 (family_assigned) — TIGR00730 family Rossman fold protein Rv1205 lprC (family_assigned) — DUF3558 domain-containing protein lprC Rv0316 (family_assigned) — muconolactone Delta-isomerase family protein Rv0316 Rv0314c (family_assigned) — membrane protein Rv0314c pirG (requalified) — exported repetitive protein pirG Rv3707c (requalified) — hypothetical protein Rv3707c Rv1987 (family_assigned) — cellulose-binding protein Rv1987 eccD3 (family_assigned) — type VII secretion system ESX-3 subunit EccD3 eccD3

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.