MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv2395B · 46 genes shown · anchor PE_PGRS41 · open gene page → · ← back to 1 hop

Evidence: Min score 0
aprB (requalified) — acid and phagosome regulated protein AprB aprB PE_PGRS41 (requalified) — acid and phagosome regulated protein AprC PE_PGRS41 aprA (requalified) — acid and phagosome regulated protein AprA aprA Rv2395 (family_assigned) — oligopeptide transporter%2C OPT family Rv2395 gabT (requalified) — 4-aminobutyrate--2-oxoglutarate transaminase gabT lppL (family_assigned) — hypothetical protein lppL frr (requalified) — ribosome recycling factor frr phoP (requalified) — two-component system response regulator PhoP phoP yajC (family_assigned) — preprotein translocase subunit YajC yajC zmp1 (requalified) — zinc metalloprotease Zmp1 zmp1 Rv2633c (requalified) — non-heme di-iron catalase Rv2633c tatC (family_assigned) — twin-arginine translocase subunit TatC tatC upp (requalified) — uracil phosphoribosyltransferase upp Rv3208 (family_assigned) — TetR/AcrR family transcriptional regulator Rv3208 ggtB (family_assigned) — gamma-glutamyltransferase family protein ggtB che1 (requalified) — ferrochelatase che1 cysH (requalified) — phosphoadenylyl-sulfate reductase cysH sirA (requalified) — sulfite reductase sirA atpB (family_assigned) — F0F1 ATP synthase subunit A atpB pcd (requalified) — piperideine-6-carboxylic acid dehydrogenase pcd Rv0147 (requalified) — aldehyde dehydrogenase Rv0147 gabD1 (requalified) — succinate-semialdehyde dehydrogenase gabD1 mmsA (requalified) — CoA-acylating methylmalonate-semialdehyde dehydrog mmsA Rv0223c (requalified) — aldehyde dehydrogenase Rv0223c gabD2 (requalified) — succinic semialdehyde dehydrogenase gabD2 Rv3212 (family_assigned) — hypothetical protein Rv3212 Rv0556 (family_assigned) — DUF3592 domain-containing protein Rv0556 Rv1081c (dark) — DUF4307 domain-containing protein Rv1081c Rv0996 (family_assigned) — hypothetical protein Rv0996 Rv2743c (family_assigned) — hypothetical protein Rv2743c Rv0431 (requalified) — tuberculin-like peptide Rv0431 rpsB (requalified) — 30S ribosomal protein S2 rpsB rplM (requalified) — 50S ribosomal protein L13 rplM rplT (requalified) — 50S ribosomal protein L20 rplT rplQ (requalified) — 50S ribosomal protein L17 rplQ rpsO (requalified) — 30S ribosomal protein S15 rpsO rplP (requalified) — 50S ribosomal protein L16 rplP phoR (requalified) — sensory box histidine kinase PhoR phoR Rv0600c (requalified) — two component sensor kinase HK1 Rv0600c prrB (requalified) — two-component system sensor histidine kinase PrrB prrB trcS (family_assigned) — HAMP domain-containing sensor histidine kinase trcS tcrY (requalified) — two component sensor kinase TcrY tcrY senX3 (requalified) — two-component system sensor histidine kinase SenX3 senX3 secE1 (requalified) — preprotein translocase SecE secE1 secY (family_assigned) — preprotein translocase subunit SecY secY secG (family_assigned) — preprotein translocase subunit SecG secG

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.