MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv2395A · 35 genes shown · anchor aprB · open gene page → · ← back to 1 hop

Evidence: Min score 0
aprA (requalified) — acid and phagosome regulated protein AprA aprA aprB (requalified) — acid and phagosome regulated protein AprB aprB Rv2395 (family_assigned) — oligopeptide transporter%2C OPT family Rv2395 PE_PGRS41 (requalified) — acid and phagosome regulated protein AprC PE_PGRS41 upp (requalified) — uracil phosphoribosyltransferase upp Rv3208 (family_assigned) — TetR/AcrR family transcriptional regulator Rv3208 tatC (family_assigned) — twin-arginine translocase subunit TatC tatC gabT (requalified) — 4-aminobutyrate--2-oxoglutarate transaminase gabT lppL (family_assigned) — hypothetical protein lppL frr (requalified) — ribosome recycling factor frr ggtB (family_assigned) — gamma-glutamyltransferase family protein ggtB che1 (requalified) — ferrochelatase che1 cysH (requalified) — phosphoadenylyl-sulfate reductase cysH sirA (requalified) — sulfite reductase sirA atpB (family_assigned) — F0F1 ATP synthase subunit A atpB zmp1 (requalified) — zinc metalloprotease Zmp1 zmp1 Rv2633c (requalified) — non-heme di-iron catalase Rv2633c deoA (requalified) — thymidine phosphorylase deoA pyrH (requalified) — UMP kinase pyrH pyrF (requalified) — orotidine-5'-phosphate decarboxylase pyrF rpiB (requalified) — ribose-5-phosphate isomerase B rpiB deoD (requalified) — purine-nucleoside phosphorylase deoD guaA (requalified) — glutamine-hydrolyzing GMP synthase guaA narL (requalified) — two-component system response regulator NarL narL sirR (family_assigned) — manganese-binding transcriptional regulator MntR sirR parD1 (family_assigned) — type II toxin-antitoxin system ParD family antitox parD1 Rv1167c (family_assigned) — TetR/AcrR family transcriptional regulator Rv1167c Rv0273c (family_assigned) — TetR/AcrR family transcriptional regulator Rv0273c Rv1474c (family_assigned) — helix-turn-helix domain-containing protein Rv1474c tatA (family_assigned) — Sec-independent protein translocase subunit TatA tatA tatB (requalified) — Sec-independent protein translocase protein TatB tatB helY (requalified) — RNA helicase helY pafA (requalified) — Pup--protein ligase pafA Rv2091c (family_assigned) — DUF4333 domain-containing protein Rv2091c pafB (family_assigned) — YafY family protein pafB

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.