MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv2368c · 46 genes shown · anchor ybeY · open gene page → · ← back to 1 hop

Evidence: Min score 0
phoH1 (requalified) — phosphate starvation-inducible protein PhoH phoH1 Rv2367c (requalified) — endoribonuclease Rv2367c Rv2366c (family_assigned) — hemolysin family protein Rv2366c Rv2365c (requalified) — cytidine deaminase Rv2365c era (requalified) — GTPase Era era recO (requalified) — DNA repair protein RecO recO Rv2369c (dark) — hypothetical protein Rv2369c Rv2370c (family_assigned) — PucR family transcriptional regulator Rv2370c rsfS (requalified) — ribosome silencing factor rsfS cmk (requalified) — (d)CMP kinase cmk clpX (family_assigned) — ATP-dependent Clp protease ATP-binding subunit Clp clpX cinA (requalified) — competence/damage-inducible protein A cinA Rv2372c (requalified) — 16S rRNA (uracil(1498)-N(3))-methyltransferase Rv2372c sodA (requalified) — superoxide dismutase sodA rplQ (requalified) — 50S ribosomal protein L17 rplQ folP1 (requalified) — dihydropteroate synthase folP1 mec (requalified) — CysO-cysteine peptidase mec rpsF (requalified) — 30S ribosomal protein S6 rpsF rpsP (requalified) — 30S ribosomal protein S16 rpsP recR (requalified) — recombination mediator RecR recR Rv2361c (requalified) — decaprenyl diphosphate synthase Rv2361c Rv2360c (family_assigned) — hypothetical protein Rv2360c amiA2 (requalified) — amidase amiA2 Rv3644c (family_assigned) — DNA polymerase III subunit delta' Rv3644c rplN (requalified) — 50S ribosomal protein L14 rplN nadD (requalified) — nicotinate-nucleotide adenylyltransferase nadD rplU (requalified) — 50S ribosomal protein L21 rplU rplS (requalified) — 50S ribosomal protein L19 rplS rpmA (requalified) — 50S ribosomal protein L27 rpmA engA (requalified) — ribosome biogenesis GTPase Der engA Rv1711 (requalified) — pseudouridine synthase Rv1711 scpB (family_assigned) — SMC-Scp complex subunit ScpB scpB scpA (requalified) — segregation/condensation protein A scpA rpsA (requalified) — 30S ribosomal protein S1 rpsA aroA (requalified) — 3-phosphoshikimate 1-carboxyvinyltransferase aroA clpP1 (family_assigned) — ATP-dependent CLP protease proteolytic subunit 1 clpP1 clpP2 (family_assigned) — ATP-dependent CLP protease proteolytic subunit Clp clpP2 Rv2456c (requalified) — MFS transporter Rv2456c mobA (requalified) — molybdenum cofactor guanylyltransferase mobA mmuM (requalified) — homocysteine S-methyltransferase mmuM ftsH (requalified) — ATP-dependent zinc metalloprotease FtsH ftsH pncB1 (requalified) — nicotinate phosphoribosyltransferase pncB1 pncB2 (requalified) — nicotinate phosphoribosyltransferase pncB2 nadR (requalified) — nicotinamide-nucleotide adenylyltransferase nadR nadC (requalified) — carboxylating nicotinate-nucleotide diphosphorylas nadC nudC (requalified) — NAD(+) diphosphatase nudC

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.