MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv2363 · 46 genes shown · anchor gatB · open gene page → · ← back to 1 hop

Evidence: Min score 0
amiA2 (requalified) — amidase amiA2 gatB (family_assigned) — Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subun gatB acyP (requalified) — acylphosphatase acyP Rv3551 (family_assigned) — CoA transferase subunit A Rv3551 gatC (family_assigned) — Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subun gatC Rv2361c (requalified) — decaprenyl diphosphate synthase Rv2361c recO (requalified) — DNA repair protein RecO recO Rv2360c (family_assigned) — hypothetical protein Rv2360c pcd (requalified) — piperideine-6-carboxylic acid dehydrogenase pcd aldA (requalified) — aldehyde dehydrogenase aldA Rv0147 (requalified) — aldehyde dehydrogenase Rv0147 Rv0223c (requalified) — aldehyde dehydrogenase Rv0223c aspS (requalified) — aspartate--tRNA ligase aspS gatA (family_assigned) — Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subun gatA amiD (requalified) — amidase amiD amiB2 (requalified) — amidase amiB2 pta (requalified) — phosphate acetyltransferase pta Rv3175 (requalified) — amidase Rv3175 amiC (requalified) — amidase amiC Rv3552 (family_assigned) — CoA-transferase subunit beta Rv3552 echA20 (family_assigned) — enoyl-CoA hydratase family protein echA20 Rv3553 (requalified) — nitronate monooxygenase Rv3553 Rv3549c (family_assigned) — SDR family oxidoreductase Rv3549c Rv3548c (family_assigned) — SDR family oxidoreductase Rv3548c fadE30 (family_assigned) — acyl-CoA dehydrogenase family protein fadE30 atpH (family_assigned) — F0F1 ATP synthase subunit B/delta atpH Rv1086 (family_assigned) — undecaprenyl diphosphate synthase family protein Rv1086 dxr (requalified) — 1-deoxy-D-xylulose-5-phosphate reductoisomerase dxr cdsA (requalified) — phosphatidate cytidylyltransferase cdsA recR (requalified) — recombination mediator RecR recR phoH1 (requalified) — phosphate starvation-inducible protein PhoH phoH1 Rv3644c (family_assigned) — DNA polymerase III subunit delta' Rv3644c Rv0556 (family_assigned) — DUF3592 domain-containing protein Rv0556 Rv3212 (family_assigned) — hypothetical protein Rv3212 Rv0497 (family_assigned) — hypothetical protein Rv0497 Rv3292 (family_assigned) — VOC family protein Rv3292 acs (requalified) — acetate--CoA ligase acs gabT (requalified) — 4-aminobutyrate--2-oxoglutarate transaminase gabT ackA (requalified) — acetate kinase ackA fadB (requalified) — fatty oxidation protein FadB fadB adhE1 (family_assigned) — zinc-type alcohol dehydrogenase subunit E adhE1 Rv0765c (family_assigned) — SDR family oxidoreductase Rv0765c Rv0770 (requalified) — NAD(P)-dependent oxidoreductase Rv0770 adhB (requalified) — alcohol dehydrogenase B adhB cyp123 (requalified) — cytochrome P450 cyp123 cyp51 (requalified) — lanosterol 14-alpha demethylase cyp51

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.