MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv2358 · 46 genes shown · anchor zur · open gene page → · ← back to 1 hop

Evidence: Min score 0
smtB (family_assigned) — metalloregulator ArsR/SmtB family transcription fa smtB zur (requalified) — zinc uptake transcriptional repressor Zur zur Rv2642 (family_assigned) — metalloregulator ArsR/SmtB family transcription fa Rv2642 glyS (requalified) — glycine--tRNA ligase glyS cmtR (family_assigned) — Cd(II)/Pb(II)-sensing metalloregulatory transcript cmtR Rv0081 (family_assigned) — lsr2/espR transcriptional regulator Rv0081 Rv1674c (family_assigned) — metalloregulator ArsR/SmtB family transcription fa Rv1674c ctpC (requalified) — manganese-exporting P-type ATPase CtpC ctpC ctpD (requalified) — cobalt-translocating P-type ATPase CtpD ctpD nmtR (requalified) — Ni(II)/Co(II)-sensing metalloregulatory transcript nmtR sirR (family_assigned) — manganese-binding transcriptional regulator MntR sirR ideR (family_assigned) — iron-dependent transcriptional regulator IdeR ideR cadI (requalified) — cadmium-induced metalloenzyme CadI cadI rpoA (family_assigned) — DNA-directed RNA polymerase subunit alpha rpoA sufR (family_assigned) — suf operon transcriptional regulator SufR sufR rpoB (family_assigned) — DNA-directed RNA polymerase subunit beta rpoB rpoC (family_assigned) — DNA-directed RNA polymerase subunit beta' rpoC rpoZ (family_assigned) — DNA-directed RNA polymerase subunit omega rpoZ arsC (family_assigned) — ACR3 family arsenite efflux transporter arsC Rv1931c (family_assigned) — transcriptional regulator Rv1931c Rv0494 (family_assigned) — HTH-type transcriptional regulator Rv0494 Rv3167c (family_assigned) — TetR/AcrR family transcriptional regulator Rv3167c htpG (requalified) — molecular chaperone HtpG htpG ppa (requalified) — inorganic diphosphatase ppa Rv1515c (family_assigned) — methyltransferase domain-containing protein Rv1515c serS (requalified) — serine--tRNA ligase serS ileS (requalified) — isoleucine--tRNA ligase ileS ctpG (requalified) — cation transporter ATPase CptG ctpG Rv1993c (family_assigned) — DUF1490 family protein Rv1993c Rv1995 (family_assigned) — hemerythrin domain-containing protein Rv1995 Rv2640c (family_assigned) — Rv2640c family ArsR-like transcriptional regulator Rv2640c mazF6 (requalified) — type II toxin-antitoxin system toxin endoribonucle mazF6 Rv0082 (family_assigned) — NADH-quinone oxidoreductase subunit B family prote Rv0082 Rv0083 (requalified) — oxidoreductase Rv0083 hycP (family_assigned) — hypothetical protein hycP hycQ (requalified) — hydrogenase HycQ hycQ hycD (family_assigned) — respiratory chain complex I subunit 1 family prote hycD hycE (family_assigned) — NADH-quinone oxidoreductase subunit C hycE cmr (family_assigned) — HTH-type transcriptional regulator Cmr cmr embR (requalified) — response regulator transcription factor EmbR embR nadR (requalified) — nicotinamide-nucleotide adenylyltransferase nadR Rv3269 (family_assigned) — DUF1490 family protein Rv3269 lcp1 (requalified) — phosphotransferase Lcp1 lcp1 Rv3268 (family_assigned) — hypothetical protein Rv3268 sodC (family_assigned) — superoxide dismutase family protein sodC rmlD (requalified) — dTDP-4-dehydrorhamnose reductase rmlD

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.