MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv2357c · 46 genes shown · anchor zur · open gene page → · ← back to 1 hop

Evidence: Min score 0
glyS (requalified) — glycine--tRNA ligase glyS htpG (requalified) — molecular chaperone HtpG htpG ppa (requalified) — inorganic diphosphatase ppa Rv1515c (family_assigned) — methyltransferase domain-containing protein Rv1515c zur (requalified) — zinc uptake transcriptional repressor Zur zur serS (requalified) — serine--tRNA ligase serS ileS (requalified) — isoleucine--tRNA ligase ileS polA (requalified) — DNA polymerase I polA leuS (requalified) — leucine--tRNA ligase leuS alaS (requalified) — alanine--tRNA ligase alaS cdd (requalified) — cytidine deaminase cdd Rv2365c (requalified) — cytidine deaminase Rv2365c argS (requalified) — arginine--tRNA ligase argS dnaK (requalified) — molecular chaperone DnaK dnaK Rv2264c (family_assigned) — Hsp70 family protein Rv2264c Rv0312 (family_assigned) — Hsp70 family protein Rv0312 Rv3446c (family_assigned) — type VII secretion-associated protein Rv3446c dnaJ2 (requalified) — molecular chaperone DnaJ dnaJ2 dnaJ1 (requalified) — chaperone protein DnaJ dnaJ1 atpH (family_assigned) — F0F1 ATP synthase subunit B/delta atpH atpF (family_assigned) — F0F1 ATP synthase subunit B atpF atpE (family_assigned) — F0F1 ATP synthase subunit C atpE atpG (family_assigned) — F0F1 ATP synthase subunit gamma atpG atpA (family_assigned) — F0F1 ATP synthase subunit alpha atpA atpD (family_assigned) — F0F1 ATP synthase subunit beta atpD Rv1516c (requalified) — glycosyltransferase Rv1516c Rv1514c (family_assigned) — glycosyltransferase family 2 protein Rv1514c Rv1518 (requalified) — glycosyltransferase Rv1518 Rv1432 (requalified) — NAD(P)/FAD-dependent oxidoreductase Rv1432 rpoA (family_assigned) — DNA-directed RNA polymerase subunit alpha rpoA smtB (family_assigned) — metalloregulator ArsR/SmtB family transcription fa smtB sufR (family_assigned) — suf operon transcriptional regulator SufR sufR rpoB (family_assigned) — DNA-directed RNA polymerase subunit beta rpoB rpoC (family_assigned) — DNA-directed RNA polymerase subunit beta' rpoC rpoZ (family_assigned) — DNA-directed RNA polymerase subunit omega rpoZ cysS1 (requalified) — cysteine--tRNA ligase cysS1 Rv3835 (family_assigned) — septum formation family protein Rv3835 Rv2133c (family_assigned) — SCO1664 family protein Rv2133c Rv3836 (family_assigned) — metallopeptidase family protein Rv3836 valS (requalified) — valine--tRNA ligase valS yidD (requalified) — membrane protein insertion efficiency factor YidD yidD proS (requalified) — proline--tRNA ligase proS gltS (requalified) — glutamate--tRNA ligase gltS pheT (family_assigned) — phenylalanine--tRNA ligase subunit beta pheT metS (requalified) — methionine--tRNA ligase metS dnaN (family_assigned) — DNA polymerase III subunit beta dnaN

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.