MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv2345 · 28 genes shown · anchor dgt · open gene page → · ← back to 1 hop

Evidence: Min score 0
Rv2345 (family_assigned) — TPM domain-containing protein Rv2345 ctaD (family_assigned) — cytochrome c oxidase subunit I ctaD dgt (requalified) — deoxyguanosinetriphosphate triphosphohydrolase dgt qcrB (family_assigned) — cytochrome bc complex cytochrome b subunit qcrB ctaC (family_assigned) — cytochrome c oxidase subunit II ctaC qcrA (requalified) — hypothetical protein qcrA Rv2199c (family_assigned) — cytochrome c oxidase subunit 4 Rv2199c ctaE (family_assigned) — heme-copper oxidase subunit III ctaE qcrC (requalified) — cytochrome c qcrC dnaG (requalified) — DNA primase dnaG Rv2876 (requalified) — transmembrane protein Rv2876 lpqB (requalified) — MtrAB system accessory lipoprotein LpqB lpqB lpqE (family_assigned) — hypothetical protein lpqE ndkA (requalified) — nucleoside-diphosphate kinase ndkA deoD (requalified) — purine-nucleoside phosphorylase deoD pykA (requalified) — pyruvate kinase pykA gltB (family_assigned) — glutamate synthase large subunit gltB dnaB (requalified) — replicative DNA helicase dnaB engA (requalified) — ribosome biogenesis GTPase Der engA rphA (requalified) — ribonuclease PH rphA sigA (requalified) — RNA polymerase sigma factor sigA sigB (family_assigned) — sigma-70 family RNA polymerase sigma factor SigB sigB mtrB (requalified) — two-component system sensor histidine kinase MtrB mtrB mtrA (requalified) — two-component system response regulator MtrA mtrA Rv3243c (family_assigned) — LmeA family phospholipid-binding protein Rv3243c Rv3802c (requalified) — phospholipase Rv3802c lprC (family_assigned) — DUF3558 domain-containing protein lprC Rv3668c (requalified) — protease Rv3668c

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.