MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv2344c · 46 genes shown · anchor dnaG · open gene page → · ← back to 1 hop

Evidence: Min score 0
dgt (requalified) — deoxyguanosinetriphosphate triphosphohydrolase dgt ndkA (requalified) — nucleoside-diphosphate kinase ndkA deoD (requalified) — purine-nucleoside phosphorylase deoD pykA (requalified) — pyruvate kinase pykA dnaG (requalified) — DNA primase dnaG Rv2345 (family_assigned) — TPM domain-containing protein Rv2345 gltB (family_assigned) — glutamate synthase large subunit gltB atpH (family_assigned) — F0F1 ATP synthase subunit B/delta atpH pheT (family_assigned) — phenylalanine--tRNA ligase subunit beta pheT rsmI (requalified) — 16S rRNA (cytidine(1402)-2'-O)-methyltransferase rsmI Rv2230c (requalified) — Nif3-like dinuclear metal center hexameric protein Rv2230c argG (requalified) — argininosuccinate synthase argG def (requalified) — peptide deformylase def rpsJ (requalified) — 30S ribosomal protein S10 rpsJ rpsL (requalified) — 30S ribosomal protein S12 rpsL rpsO (requalified) — 30S ribosomal protein S15 rpsO rpsB (requalified) — 30S ribosomal protein S2 rpsB rpsG (requalified) — 30S ribosomal protein S7 rpsG rpsP (requalified) — 30S ribosomal protein S16 rpsP cdd (requalified) — cytidine deaminase cdd pmmB (requalified) — phospho-sugar mutase pmmB deoA (requalified) — thymidine phosphorylase deoA apt (requalified) — adenine phosphoribosyltransferase apt add (requalified) — adenosine deaminase add hpt (requalified) — hypoxanthine phosphoribosyltransferase hpt eno (requalified) — phosphopyruvate hydratase eno rplJ (requalified) — 50S ribosomal protein L10 rplJ rplX (requalified) — 50S ribosomal protein L24 rplX rplB (requalified) — 50S ribosomal protein L2 rplB rplE (requalified) — 50S ribosomal protein L5 rplE rplF (requalified) — 50S ribosomal protein L6 rplF dnaB (requalified) — replicative DNA helicase dnaB engA (requalified) — ribosome biogenesis GTPase Der engA rphA (requalified) — ribonuclease PH rphA sigA (requalified) — RNA polymerase sigma factor sigA sigB (family_assigned) — sigma-70 family RNA polymerase sigma factor SigB sigB ctaD (family_assigned) — cytochrome c oxidase subunit I ctaD qcrB (family_assigned) — cytochrome bc complex cytochrome b subunit qcrB ctaC (family_assigned) — cytochrome c oxidase subunit II ctaC qcrA (requalified) — hypothetical protein qcrA Rv2199c (family_assigned) — cytochrome c oxidase subunit 4 Rv2199c gltD (family_assigned) — glutamate synthase subunit beta gltD fprA (requalified) — ferredoxin--NADP(+) reductase FprA fprA fadH (requalified) — NADPH-dependent 2%2C4-dienoyl-CoA reductase fadH fprB (requalified) — FAD-dependent oxidoreductase fprB carB (family_assigned) — carbamoyl-phosphate synthase large subunit carB

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.