MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv2343c · 46 genes shown · anchor dgt · open gene page → · ← back to 1 hop

Evidence: Min score 0
dnaG (requalified) — DNA primase dnaG dnaB (requalified) — replicative DNA helicase dnaB dgt (requalified) — deoxyguanosinetriphosphate triphosphohydrolase dgt engA (requalified) — ribosome biogenesis GTPase Der engA rphA (requalified) — ribonuclease PH rphA sigA (requalified) — RNA polymerase sigma factor sigA sigB (family_assigned) — sigma-70 family RNA polymerase sigma factor SigB sigB fmt (requalified) — methionyl-tRNA formyltransferase fmt dnaE1 (family_assigned) — DNA polymerase III subunit alpha dnaE1 Rv2345 (family_assigned) — TPM domain-containing protein Rv2345 pheT (family_assigned) — phenylalanine--tRNA ligase subunit beta pheT adnB (requalified) — ATP-dependent DNA helicase AdnB adnB Rv3644c (family_assigned) — DNA polymerase III subunit delta' Rv3644c Rv0057 (dark) — hypothetical protein Rv0057 darT (requalified) — toxin-antitoxin system toxin DarT darT ssb (family_assigned) — single-stranded DNA-binding protein ssb rplI (requalified) — 50S ribosomal protein L9 rplI Rv2943A (requalified) — transposase Rv2943A ndkA (requalified) — nucleoside-diphosphate kinase ndkA deoD (requalified) — purine-nucleoside phosphorylase deoD pykA (requalified) — pyruvate kinase pykA gltB (family_assigned) — glutamate synthase large subunit gltB cmk (requalified) — (d)CMP kinase cmk Rv1711 (requalified) — pseudouridine synthase Rv1711 scpB (family_assigned) — SMC-Scp complex subunit ScpB scpB scpA (requalified) — segregation/condensation protein A scpA Rv1708 (requalified) — initiation inhibitor protein Rv1708 rdgB (family_assigned) — RdgB/HAM1 family non-canonical purine NTP pyrophos rdgB Rv2681 (requalified) — ribonuclease D Rv2681 rpsA (requalified) — 30S ribosomal protein S1 rpsA Rv1339 (family_assigned) — hypothetical protein Rv1339 rpsD (requalified) — 30S ribosomal protein S4 rpsD rpsK (requalified) — 30S ribosomal protein S11 rpsK rpoB (family_assigned) — DNA-directed RNA polymerase subunit beta rpoB rpoA (family_assigned) — DNA-directed RNA polymerase subunit alpha rpoA rpoZ (family_assigned) — DNA-directed RNA polymerase subunit omega rpoZ whiB7 (family_assigned) — transcriptional regulator WhiB7 whiB7 whiB1 (family_assigned) — transcriptional regulator WhiB1 whiB1 rpoC (family_assigned) — DNA-directed RNA polymerase subunit beta' rpoC rbpA (family_assigned) — RNA polymerase-binding protein RbpA rbpA ideR (family_assigned) — iron-dependent transcriptional regulator IdeR ideR fmu (requalified) — 16S rRNA m5C967 methyltransferase fmu folD (requalified) — bifunctional methylenetetrahydrofolate dehydrogena folD dfrA (requalified) — dihydrofolate reductase dfrA gcvT (requalified) — aminomethyltransferase gcvT metH (requalified) — methionine synthase metH

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.