MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv2339 · 46 genes shown · anchor eccD3 · open gene page → · ← back to 1 hop

Evidence: Min score 0
mmpL9 (requalified) — RND transporter MmpL9 mmpL9 Rv1598c (family_assigned) — nitroreductase family deazaflavin-dependent oxidor Rv1598c Rv1303 (family_assigned) — ATP synthase subunit I Rv1303 eccD3 (family_assigned) — type VII secretion system ESX-3 subunit EccD3 eccD3 lppX (requalified) — LppX_LprAFG lipoprotein lppX Rv0128 (family_assigned) — YoaK family protein Rv0128 eccB3 (family_assigned) — type VII secretion system ESX-3 subunit EccB3 eccB3 Rv0466 (requalified) — acyl-[acyl-carrier-protein] thioesterase Rv0466 Rv1278 (family_assigned) — AAA family ATPase Rv1278 Rv0523c (family_assigned) — nitroreductase family deazaflavin-dependent oxidor Rv0523c lprA (requalified) — TLR2 agonist LprA lprA Rv0309 (requalified) — L%2CD-transpeptidase Rv0309 Rv0184 (dark) — DUF2786 domain-containing protein Rv0184 mmpL5 (requalified) — siderophore RND transporter MmpL5 mmpL5 mmpL2 (requalified) — RND transporter MmpL2 mmpL2 mmpL4 (requalified) — transmembrane transport protein MmpL4 mmpL4 mmpL1 (requalified) — RND transporter MmpL1 mmpL1 atpB (family_assigned) — F0F1 ATP synthase subunit A atpB atpE (family_assigned) — F0F1 ATP synthase subunit C atpE atpF (family_assigned) — F0F1 ATP synthase subunit B atpF atpH (family_assigned) — F0F1 ATP synthase subunit B/delta atpH atpG (family_assigned) — F0F1 ATP synthase subunit gamma atpG atpA (family_assigned) — F0F1 ATP synthase subunit alpha atpA eccC3 (family_assigned) — type VII secretion system ESX-3 FtsK/SpoIIIE famil eccC3 eccE3 (family_assigned) — type VII secretion system ESX-3 subunit EccE3 eccE3 mycP3 (requalified) — type VII secretion system ESX-3 serine protease my mycP3 espG3 (requalified) — type VII secretion system ESX-3 associated protein espG3 eccB5 (family_assigned) — type VII secretion system ESX-5 subunit EccB5 eccB5 pks1 (requalified) — polyketide synthase pks1 mmpL7 (requalified) — phthiocerol dimycocerosate RND transporter MmpL7 mmpL7 PPE42 (family_assigned) — PPE family protein PPE42 PPE42 PPE13 (family_assigned) — PPE family protein PPE13 PPE13 papA5 (requalified) — phthiocerol/phthiodiolone dimycocerosyl transferas papA5 PPE10 (family_assigned) — PPE family protein PPE10 PPE10 mak (requalified) — maltokinase mak treS (requalified) — maltose alpha-D-glucosyltransferase treS Rv0204c (family_assigned) — TIGR00374 family protein Rv0204c papA2 (requalified) — trehalose-2-sulfate acyltransferase papA2 papA1 (requalified) — acyltransferase PapA1 papA1 papA3 (requalified) — acyltransferase PapA3 papA3 eccA3 (requalified) — ESX-3 secretion system protein EccA eccA3 PPE4 (family_assigned) — PPE family protein PPE4 PPE4 lprC (family_assigned) — DUF3558 domain-containing protein lprC lprB (family_assigned) — DUF3558 domain-containing protein lprB Rv3035 (family_assigned) — hypothetical protein Rv3035 ttfA (requalified) — trehalose monomycolate transport factor TtfA ttfA

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.