MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv2336 · 44 genes shown · open gene page → · ← back to 1 hop

Evidence: Min score 0
tyzA (requalified) — hypothetical protein tyzA csm5 (requalified) — type III-A CRISPR-associated RAMP protein Csm5 csm5 Rv1754c (requalified) — DUF4185 domain-containing protein Rv1754c mmpS1 (family_assigned) — MmpS family protein mmpS1 PPE44 (family_assigned) — PPE family protein PPE44 PPE44 Rv0963c (family_assigned) — hypothetical protein Rv0963c esxH (requalified) — type VII secretion system effector EsxH esxH Rv1320c (family_assigned) — adenylate/guanylate cyclase domain-containing prot Rv1320c mbtM (requalified) — long-chain-fatty acid--ACP ligase MbtM mbtM csm4 (requalified) — type III-A CRISPR-associated RAMP protein Csm4 csm4 csm3 (requalified) — type III-A CRISPR-associated RAMP protein Csm3 csm3 csm2 (requalified) — type III-A CRISPR-associated protein Csm2 csm2 cas10 (requalified) — type III-A CRISPR-associated protein Cas10/Csm1 cas10 Rv2824c (requalified) — CRISPR-associated endoribonuclease Cas6 Rv2824c Rv2818c (requalified) — CRISPR-associated protein Csm6 Rv2818c Rv3668c (requalified) — protease Rv3668c spmT (requalified) — sphingomyelinase spmT Rv0312 (family_assigned) — Hsp70 family protein Rv0312 Rv0431 (requalified) — tuberculin-like peptide Rv0431 rpsF (requalified) — 30S ribosomal protein S6 rpsF Rv3707c (requalified) — hypothetical protein Rv3707c mmpL1 (requalified) — RND transporter MmpL1 mmpL1 fadD30 (requalified) — long-chain-fatty-acid--AMP ligase FadD30 fadD30 pks6 (requalified) — membrane bound polyketide synthase pks6 Rv3096 (requalified) — 1%2C4-beta-xylanase Rv3096 PE8 (family_assigned) — PE family protein PE8 PE8 Rv1794 (family_assigned) — ESX secretion-associated protein EspG Rv1794 Rv2771c (family_assigned) — flavodoxin family protein Rv2771c PE27 (family_assigned) — PE family protein PE27 PE27 Rv0964c (family_assigned) — hypothetical protein Rv0964c lprP (family_assigned) — LppA family lipoprotein lprP Rv0965c (family_assigned) — hypothetical protein Rv0965c PE_PGRS43 (family_assigned) — PE-PGRS family protein PE_PGRS43 PE_PGRS43 Rv2305 (family_assigned) — hypothetical protein Rv2305 esxG (requalified) — type VII secretion system protein EsxG esxG espG3 (requalified) — type VII secretion system ESX-3 associated protein espG3 esxS (requalified) — ESAT-6 like protein EsxS esxS eccD3 (family_assigned) — type VII secretion system ESX-3 subunit EccD3 eccD3 esxB (family_assigned) — type VII secretion system ESX-1 WXG100 family targ esxB eccC3 (family_assigned) — type VII secretion system ESX-3 FtsK/SpoIIIE famil eccC3 ndkA (requalified) — nucleoside-diphosphate kinase ndkA relA (family_assigned) — RelA/SpoT family protein relA pykA (requalified) — pyruvate kinase pykA cpdA (requalified) — 3'%2C5'-cyclic adenosine monophosphate phosphodies cpdA

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.