MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv2330c · 38 genes shown · anchor narK1 · open gene page → · ← back to 1 hop

Evidence: Min score 0
lppP (family_assigned) — LppP/LprE family lipoprotein lppP Rv2331 (family_assigned) — hypothetical protein Rv2331 narK1 (requalified) — nitrate/nitrite transporter narK1 Rv2331A (family_assigned) — hypothetical protein Rv2331A mez (requalified) — NAD-dependent malic enzyme mez lprN (family_assigned) — Mce family lipoprotein LprN lprN fadE36 (family_assigned) — phosphotransferase family protein fadE36 lprO (family_assigned) — phosphodiester glycosidase family protein lprO narH (family_assigned) — nitrate reductase subunit beta narH narG (family_assigned) — nitrate reductase subunit alpha narG narX (family_assigned) — respiratory nitrate reductase subunit gamma narX narI (family_assigned) — respiratory nitrate reductase subunit gamma narI nirB (family_assigned) — nitrite reductase large subunit NirB nirB nirD (family_assigned) — nitrite reductase small subunit NirD nirD mdh (requalified) — malate dehydrogenase mdh fum (requalified) — class II fumarate hydratase fum pykA (requalified) — pyruvate kinase pykA bkdB (family_assigned) — 3-methyl-2-oxobutanoate dehydrogenase subunit beta bkdB pca (requalified) — pyruvate carboxylase pca glcB (requalified) — malate synthase G glcB mce4D (family_assigned) — virulence factor Mce family protein mce4D mce4C (family_assigned) — virulence factor Mce family protein mce4C mce4B (family_assigned) — virulence factor Mce family protein mce4B mce4F (family_assigned) — virulence factor Mce family protein mce4F yrbE4B (family_assigned) — ABC transporter permease yrbE4B Rv3492c (requalified) — Mce associated protein Rv3492c fadE2 (requalified) — acyl-CoA dehydrogenase fadE2 fadE1 (requalified) — acyl-CoA dehydrogenase FadE1 fadE1 Rv2766c (requalified) — short-chain type dehydrogenase/reductase Rv2766c Rv3168 (family_assigned) — phosphotransferase family protein Rv3168 Rv3762c (requalified) — alkyl/aryl-sulfatase Rv3762c htdZ (requalified) — 3-hydroxyacyl-thioester dehydratase HtdZ htdZ wag31 (requalified) — cell wall synthesis protein Wag31 wag31 sigD (requalified) — ECF RNA polymerase sigma factor SigD sigD pirG (requalified) — exported repetitive protein pirG Rv0180c (family_assigned) — YhgE/Pip domain-containing protein Rv0180c Rv0181c (family_assigned) — pirin family protein Rv0181c ripA (family_assigned) — NlpC/P60 family peptidoglycan endopeptidase RipA ripA

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.