MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv2326c · 46 genes shown · open gene page → · ← back to 1 hop

Evidence: Min score 0
Rv2326c (family_assigned) — ABC transporter ATP-binding protein Rv2326c Rv2325c (family_assigned) — CbiQ family ECF transporter T component Rv2325c Rv2327 (family_assigned) — MarR family winged helix-turn-helix transcriptiona Rv2327 Rv1125 (family_assigned) — WS/DGAT domain-containing protein Rv1125 pta (requalified) — phosphate acetyltransferase pta Rv1610 (family_assigned) — TIGR02234 family membrane protein Rv1610 dppA (family_assigned) — ABC transporter substrate-binding protein dppA Rv3707c (requalified) — hypothetical protein Rv3707c ttfA (requalified) — trehalose monomycolate transport factor TtfA ttfA cysA1 (family_assigned) — sulfate ABC transporter ATP-binding protein CysA cysA1 Rv1836c (family_assigned) — substrate-binding domain-containing protein Rv1836c oppB (family_assigned) — ABC transporter permease oppB oppC (family_assigned) — ABC transporter permease oppC dppD (family_assigned) — ABC transporter ATP-binding protein dppD Rv3256c (requalified) — TobH protein Rv3256c Rv1634 (requalified) — MFS transporter Rv1634 Rv1510 (family_assigned) — hypothetical protein Rv1510 Rv3630 (family_assigned) — hypothetical protein Rv3630 lpqZ (family_assigned) — glycine betaine ABC transporter substrate-binding lpqZ PE23 (family_assigned) — PE family protein PE23 PE23 ephC (requalified) — epoxide hydrolase EphC ephC pks13 (requalified) — polyketide synthase Pks13 pks13 pks12 (requalified) — type I polyketide synthase pks12 ppsC (requalified) — phthiocerol type I polyketide synthase PpsC ppsC pks5 (requalified) — sulfolipid-1 biosynthesis phthioceranic/hydroxypht pks5 pks2 (requalified) — phthioceranic/hydroxyphthioceranic acid synthase pks2 ackA (requalified) — acetate kinase ackA glcB (requalified) — malate synthase G glcB Rv2455c (family_assigned) — 2-oxoacid:acceptor oxidoreductase subunit alpha Rv2455c bkdC (family_assigned) — dihydrolipoamide acetyltransferase family protein bkdC acs (requalified) — acetate--CoA ligase acs Rv2454c (family_assigned) — 2-oxoacid:ferredoxin oxidoreductase subunit beta Rv2454c trpE (requalified) — anthranilate synthase component I trpE trpC (requalified) — indole-3-glycerol phosphate synthase TrpC trpC bcpB (requalified) — peroxiredoxin BcpB bcpB Rv3843c (family_assigned) — DUF4328 domain-containing protein Rv3843c dppB (family_assigned) — ABC transporter permease dppB dppC (family_assigned) — dipeptide ABC transporter permease DppC dppC Rv3662c (requalified) — oxidoreductase Rv3662c pirG (requalified) — exported repetitive protein pirG eccD3 (family_assigned) — type VII secretion system ESX-3 subunit EccD3 eccD3 ask (requalified) — aspartate kinase ask asd (requalified) — aspartate-semialdehyde dehydrogenase asd lpqF (requalified) — serine hydrolase lpqF Rv2743c (family_assigned) — hypothetical protein Rv2743c Rv0385 (requalified) — FAD-binding oxidoreductase Rv0385

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.