MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv2324 · 46 genes shown · open gene page → · ← back to 1 hop

Evidence: Min score 0
Rv2324 (family_assigned) — Lrp/AsnC family transcriptional regulator Rv2324 Rv2323c (family_assigned) — hypothetical protein Rv2323c Rv1725c (family_assigned) — winged helix-turn-helix transcriptional regulator Rv1725c Rv2621c (family_assigned) — helix-turn-helix domain-containing protein Rv2621c Rv2319c (requalified) — universal stress protein Rv2319c rocE (requalified) — amino acid permease rocE rocD1 (family_assigned) — Probable ornithine aminotransferase (N-terminus pa rocD1 rocD2 (family_assigned) — Probable ornithine aminotransferase (C-terminus pa rocD2 lrpA (family_assigned) — transcriptional regulator LrpA lrpA Rv1985c (family_assigned) — ArgP/LysG family DNA-binding transcriptional regul Rv1985c Rv3183 (family_assigned) — XRE family transcriptional regulator Rv3183 Rv3167c (family_assigned) — TetR/AcrR family transcriptional regulator Rv3167c iniR (family_assigned) — isoniazid response ATPase/transcriptional regulato iniR gmk (requalified) — guanylate kinase gmk Rv1931c (family_assigned) — transcriptional regulator Rv1931c Rv1724c (dark) — hypothetical protein Rv1724c sigI (requalified) — RNA polymerase sigma factor SigI sigI Rv3055 (family_assigned) — helix-turn-helix domain-containing protein Rv3055 sigJ (family_assigned) — sigma-70 family RNA polymerase sigma factor SigJ sigJ Rv2620c (dark) — hypothetical protein Rv2620c Rv2619c (family_assigned) — cupin domain-containing protein Rv2619c Rv0792c (family_assigned) — GntR family transcriptional regulator Rv0792c sufR (family_assigned) — suf operon transcriptional regulator SufR sufR lppF (requalified) — haloacid dehalogenase-like hydrolase lppF aglA (family_assigned) — glycoside hydrolase family 13 protein aglA treS (requalified) — maltose alpha-D-glucosyltransferase treS rocA (requalified) — L-glutamate gamma-semialdehyde dehydrogenase rocA proB (requalified) — glutamate 5-kinase proB argG (requalified) — argininosuccinate synthase argG argH (requalified) — argininosuccinate lyase argH lat (requalified) — L-lysine 6-transaminase lat Rv3292 (family_assigned) — VOC family protein Rv3292 cobB (requalified) — NAD-dependent protein deacylase cobB mftR (family_assigned) — mycofactocin system transcriptional regulator mftR oxyS (family_assigned) — LysR family transcriptional regulator OxyS oxyS lysE (requalified) — L-lysine exporter lysE Rv3736 (family_assigned) — AraC family transcriptional regulator Rv3736 Rv3263 (requalified) — class I SAM-dependent methyltransferase Rv3263 Rv3182 (family_assigned) — type II toxin-antitoxin system RelE/ParE family to Rv3182 Rv3066 (family_assigned) — TetR/AcrR family transcriptional regulator Rv3066 Rv3840 (family_assigned) — transcriptional regulator Rv3840 Rv1776c (family_assigned) — TetR/AcrR family transcriptional regulator Rv1776c Rv1167c (family_assigned) — TetR/AcrR family transcriptional regulator Rv1167c Rv3830c (family_assigned) — TetR/AcrR family transcriptional regulator Rv3830c Rv0494 (family_assigned) — HTH-type transcriptional regulator Rv0494 embR (requalified) — response regulator transcription factor EmbR embR

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.