MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv2323c · 46 genes shown · anchor rocD1 · open gene page → · ← back to 1 hop

Evidence: Min score 0
Rv2323c (family_assigned) — hypothetical protein Rv2323c rocD1 (family_assigned) — Probable ornithine aminotransferase (N-terminus pa rocD1 rocD2 (family_assigned) — Probable ornithine aminotransferase (C-terminus pa rocD2 rocE (requalified) — amino acid permease rocE Rv2319c (requalified) — universal stress protein Rv2319c Rv2324 (family_assigned) — Lrp/AsnC family transcriptional regulator Rv2324 gmk (requalified) — guanylate kinase gmk corA (requalified) — magnesium/cobalt transporter CorA corA chaA (requalified) — calcium:proton antiporter chaA yhjD (requalified) — inner membrane protein YhjD yhjD Rv2991 (requalified) — PPOX class F420-dependent oxidoreductase Rv2991 Rv2707 (family_assigned) — YihY/virulence factor BrkB family protein Rv2707 Rv1155 (requalified) — PPOX class F420-dependent oxidoreductase Rv1155 rocA (requalified) — L-glutamate gamma-semialdehyde dehydrogenase rocA proB (requalified) — glutamate 5-kinase proB argG (requalified) — argininosuccinate synthase argG argH (requalified) — argininosuccinate lyase argH aglA (family_assigned) — glycoside hydrolase family 13 protein aglA treS (requalified) — maltose alpha-D-glucosyltransferase treS lppF (requalified) — haloacid dehalogenase-like hydrolase lppF Rv1725c (family_assigned) — winged helix-turn-helix transcriptional regulator Rv1725c Rv2621c (family_assigned) — helix-turn-helix domain-containing protein Rv2621c rpoZ (family_assigned) — DNA-directed RNA polymerase subunit omega rpoZ guaA (requalified) — glutamine-hydrolyzing GMP synthase guaA apt (requalified) — adenine phosphoribosyltransferase apt pykA (requalified) — pyruvate kinase pykA ndkA (requalified) — nucleoside-diphosphate kinase ndkA hpt (requalified) — hypoxanthine phosphoribosyltransferase hpt mdh (requalified) — malate dehydrogenase mdh Rv1364c (family_assigned) — sigma factor regulatory protein Rv1364c lpqZ (family_assigned) — glycine betaine ABC transporter substrate-binding lpqZ Rv1234 (requalified) — general stress protein Rv1234 vapB33 (requalified) — type II toxin-antitoxin system antitoxin VapB33 vapB33 vapC21 (requalified) — type II toxin-antitoxin system toxin ribonuclease vapC21 hisF (family_assigned) — imidazole glycerol phosphate synthase subunit HisF hisF impA (family_assigned) — inositol monophosphatase family protein impA hisI (requalified) — phosphoribosyl-AMP cyclohydrolase hisI hisA (requalified) — bifunctional 1-(5-phosphoribosyl)-5-((5-phosphorib hisA hisH (family_assigned) — imidazole glycerol phosphate synthase subunit HisH hisH trpS (requalified) — tryptophan--tRNA ligase trpS Rv3013 (family_assigned) — amino acid-binding protein Rv3013 Rv3337 (family_assigned) — Conserved hypothetical protein Rv3337 Rv3338 (family_assigned) — Conserved hypothetical protein Rv3338 Rv3753c (family_assigned) — hypothetical protein Rv3753c Rv2446c (dark) — DUF4233 domain-containing protein Rv2446c Rv0910 (family_assigned) — SRPBCC family protein Rv0910

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.