MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv2319c · 45 genes shown · anchor rocE · open gene page → · ← back to 1 hop

Evidence: Min score 0
Rv2319c (requalified) — universal stress protein Rv2319c rocE (requalified) — amino acid permease rocE Rv2323c (family_assigned) — hypothetical protein Rv2323c rocD1 (family_assigned) — Probable ornithine aminotransferase (N-terminus pa rocD1 rocD2 (family_assigned) — Probable ornithine aminotransferase (C-terminus pa rocD2 Rv2324 (family_assigned) — Lrp/AsnC family transcriptional regulator Rv2324 lppF (requalified) — haloacid dehalogenase-like hydrolase lppF Rv0295c (family_assigned) — Stf0 family sulfotransferase Rv0295c Rv1288 (requalified) — esterase Rv1288 eccE1 (family_assigned) — type VII secretion system ESX-1 subunit EccE1 eccE1 Rv2226 (family_assigned) — CYTH and CHAD domain-containing protein Rv2226 ogt (requalified) — methylated-DNA--protein-cysteine methyltransferase ogt aglA (family_assigned) — glycoside hydrolase family 13 protein aglA treS (requalified) — maltose alpha-D-glucosyltransferase treS gmk (requalified) — guanylate kinase gmk rocA (requalified) — L-glutamate gamma-semialdehyde dehydrogenase rocA proB (requalified) — glutamate 5-kinase proB argG (requalified) — argininosuccinate synthase argG argH (requalified) — argininosuccinate lyase argH Rv1725c (family_assigned) — winged helix-turn-helix transcriptional regulator Rv1725c Rv2621c (family_assigned) — helix-turn-helix domain-containing protein Rv2621c Rv1443c (family_assigned) — hypothetical protein Rv1443c Rv3594 (requalified) — N-acetylmuramoyl-L-alanine amidase Rv3594 Rv1978 (requalified) — class I SAM-dependent methyltransferase Rv1978 hisF (family_assigned) — imidazole glycerol phosphate synthase subunit HisF hisF Rv0296c (requalified) — sulfatase Rv0296c papA3 (requalified) — acyltransferase PapA3 papA3 lprB (family_assigned) — DUF3558 domain-containing protein lprB Rv0210 (family_assigned) — hypothetical protein Rv0210 papA1 (requalified) — acyltransferase PapA1 papA1 Rv0180c (family_assigned) — YhgE/Pip domain-containing protein Rv0180c Rv1287 (family_assigned) — RrF2 family transcriptional regulator Rv1287 Rv1289 (family_assigned) — hypothetical protein Rv1289 eccD1 (family_assigned) — type VII secretion system ESX-1 subunit EccD1 eccD1 Rv0097 (family_assigned) — TauD/TfdA family dioxygenase Rv0097 mycP1 (requalified) — type VII secretion system ESX-1 serine protease my mycP1 eccB1 (family_assigned) — type VII secretion system ESX-1 subunit EccB1 eccB1 espK (family_assigned) — ESX-1 secretion-associated protein EspK espK eccCa1 (family_assigned) — type VII secretion system ESX-1 FtsK/SpoIIIE famil eccCa1 espB (requalified) — type VII secretion system ESX-1 target EspB espB panB (requalified) — 3-methyl-2-oxobutanoate hydroxymethyltransferase panB Rv1619 (requalified) — bifunctional lysylphosphatidylglycerol flippase/sy Rv1619 Rv3689 (requalified) — transmembrane protein Rv3689 Rv2025c (family_assigned) — cation diffusion facilitator family transporter Rv2025c alkA (family_assigned) — bifunctional regulatory protein/DNA repair enzyme alkA

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.