MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv2314c · 46 genes shown · anchor uspA · open gene page → · ← back to 1 hop

Evidence: Min score 0
Rv2314c (family_assigned) — TldD/PmbA family protein Rv2314c Rv2315c (family_assigned) — TldD/PmbA family protein Rv2315c Rv2313c (family_assigned) — carboxymuconolactone decarboxylase family protein Rv2313c uspA (family_assigned) — sugar ABC transporter permease uspA uspB (family_assigned) — sugar ABC transporter permease UspB uspB uspC (family_assigned) — sugar ABC transporter substrate-binding protein uspC Rv1473A (family_assigned) — transcriptional regulator Rv1473A Rv0090 (dark) — DUF2127 domain-containing protein Rv0090 Rv3118 (family_assigned) — hypothetical protein Rv3118 Rv0814c (family_assigned) — DUF1416 domain-containing protein Rv0814c Rv2525c (family_assigned) — DUF1906 domain-containing protein Rv2525c desA2 (requalified) — acyl-ACP desaturase desA2 desA1 (requalified) — acyl-ACP desaturase DesA desA1 cysC (requalified) — adenylyl-sulfate kinase cysC ugpC (family_assigned) — ABC transporter ATP-binding protein ugpC ugpC (family_assigned) — sn-glycerol-3-phosphate ABC transporter ATP-bindin ugpC sugC (family_assigned) — trehalose ABC transporter ATP-binding protein SugC sugC ugpE (family_assigned) — carbohydrate ABC transporter permease ugpE ugpA (family_assigned) — sugar ABC transporter permease ugpA Rv2040c (family_assigned) — sugar ABC transporter permease Rv2040c Rv2039c (family_assigned) — carbohydrate ABC transporter permease Rv2039c Rv1473 (family_assigned) — macrolide ABC transporter ATP-binding protein Rv1473 echA12 (requalified) — enoyl-CoA hydratase echA12 rsbW (requalified) — anti-sigma B factor RsbW rsbW Rv2709 (dark) — DUF3099 domain-containing protein Rv2709 Rv2844 (family_assigned) — ferritin-like domain-containing protein Rv2844 Rv2577 (family_assigned) — metallophosphoesterase family protein Rv2577 Rv0180c (family_assigned) — YhgE/Pip domain-containing protein Rv0180c Rv2963 (requalified) — permease Rv2963 sapM (requalified) — phosphatidylinositol-3-phosphatase sapM Rv0089 (requalified) — methyltransferase Rv0089 Rv1619 (requalified) — bifunctional lysylphosphatidylglycerol flippase/sy Rv1619 cysA3 (requalified) — thiosulfate sulfurtransferase cysA3 cysA2 (requalified) — sulfurtransferase cysA2 moaE1 (family_assigned) — molybdopterin synthase catalytic subunit 1 moaE1 Rv3120 (requalified) — class I SAM-dependent methyltransferase Rv3120 Rv2468c (requalified) — hypothetical protein Rv2468c Rv2365c (requalified) — cytidine deaminase Rv2365c Rv1332 (family_assigned) — transcriptional regulator Rv1332 Rv3668c (requalified) — protease Rv3668c ripD (family_assigned) — NlpC/P60 family peptidoglycan-binding protein RipD ripD pirG (requalified) — exported repetitive protein pirG Rv1158c (dark) — hypothetical protein Rv1158c Rv3847 (requalified) — peptidase Rv3847 aftC (requalified) — arabinofuranan 3-O-arabinosyltransferase aftC Rv3230c (requalified) — NADPH oxidoreductase Rv3230c

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.