MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv2310 · 45 genes shown · open gene page → · ← back to 1 hop

Evidence: Min score 0
Rv2310 (requalified) — excisionase Rv2310 Rv3749c (family_assigned) — hypothetical protein Rv3749c Rv2311 (family_assigned) — hypothetical protein Rv2311 Rv2309A (dark) — hypothetical protein Rv2309A Rv2807 (family_assigned) — hypothetical protein Rv2807 Rv2312 (dark) — hypothetical protein Rv2312 Rv0842 (requalified) — MFS transporter Rv0842 Rv1584c (family_assigned) — hypothetical protein Rv1584c Rv2657c (family_assigned) — helix-turn-helix domain-containing protein Rv2657c Rv0061c (dark) — hypothetical protein Rv0061c Rv3750c (requalified) — excisionase Rv3750c Rv0330c (family_assigned) — helix-turn-helix domain-containing protein Rv0330c Rv2018 (family_assigned) — DUF433 domain-containing protein Rv2018 Rv1045 (family_assigned) — nucleotidyl transferase AbiEii/AbiGii toxin family Rv1045 Rv0837c (family_assigned) — type IV toxin-antitoxin system AbiEi family antito Rv0837c recC (family_assigned) — exodeoxyribonuclease V subunit gamma recC truB (requalified) — tRNA pseudouridine(55) synthase TruB truB Rv2529 (family_assigned) — hypothetical protein Rv2529 recB (family_assigned) — exodeoxyribonuclease V subunit beta recB dinG (requalified) — ATP-dependent helicase DinG dinG Rv3327 (family_assigned) — IS110 family transposase Rv3327 Rv2806 (dark) — hypothetical protein Rv2806 Rv2805 (requalified) — transposase Rv2805 Rv2021c (family_assigned) — XRE family transcriptional regulator Rv2021c Rv0843 (family_assigned) — thiamine pyrophosphate-dependent dehydrogenase E1 Rv0843 Rv2209 (requalified) — MFS transporter Rv2209 PPE56 (family_assigned) — PPE family protein PPE56 PPE56 PPE8 (family_assigned) — PPE family protein PPE8 PPE8 PPE55 (family_assigned) — PPE family protein PPE55 PPE55 PE_PGRS28 (family_assigned) — PE-PGRS family protein PE_PGRS28 PE_PGRS28 Rv1583c (dark) — DUF2742 domain-containing protein Rv1583c Rv1582c (family_assigned) — phage/plasmid primase%2C P4 family Rv1582c Rv1586c (family_assigned) — recombinase family protein Rv1586c Rv1587c (family_assigned) — hypothetical protein Rv1587c Rv1585c (family_assigned) — hypothetical protein Rv1585c Rv1588c (family_assigned) — hypothetical protein Rv1588c Rv2655c (family_assigned) — DUF3631 domain-containing protein Rv2655c Rv2656c (dark) — DUF2742 domain-containing protein Rv2656c Rv2654c (requalified) — type II toxin-antitoxin system antitoxin Rv2654c Rv2658c (family_assigned) — hypothetical protein Rv2658c Rv2659c (requalified) — tyrosine-type recombinase/integrase Rv2659c Rv2653c (requalified) — type II toxin-antitoxin system toxin Rv2653c celA1 (requalified) — cellulase CelA celA1 Rv0157A (dark) — hypothetical protein Rv0157A Rv0500A (family_assigned) — DNA-binding protein Rv0500A

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.