MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv2284 · 46 genes shown · open gene page → · ← back to 1 hop

Evidence: Min score 0
lipM (family_assigned) — alpha/beta hydrolase lipM Rv2283 (dark) — hypothetical protein Rv2283 Rv2285 (family_assigned) — wax ester/triacylglycerol synthase family O-acyltr Rv2285 Rv0310c (family_assigned) — nuclear transport factor 2 family protein Rv0310c Rv2282c (family_assigned) — LysR family transcriptional regulator Rv2282c rpmD (requalified) — 50S ribosomal protein L30 rpmD lipI (family_assigned) — alpha/beta hydrolase lipI lipN (requalified) — lipase/esterase LipN lipN lepB (requalified) — signal peptidase I lepB nuoI (family_assigned) — NADH-quinone oxidoreductase subunit NuoI nuoI nuoG (family_assigned) — NADH-quinone oxidoreductase subunit G nuoG nuoF (family_assigned) — NADH-quinone oxidoreductase subunit NuoF nuoF nuoE (family_assigned) — NADH-quinone oxidoreductase subunit NuoE nuoE Rv0894 (family_assigned) — hypothetical protein Rv0894 Rv3327 (family_assigned) — IS110 family transposase Rv3327 Rv0395 (dark) — hypothetical protein Rv0395 lipY (requalified) — triacylglycerol lipase Lip lipY Rv2252 (requalified) — diacylglycerol kinase Rv2252 acrA1 (family_assigned) — SDR family oxidoreductase acrA1 Rv3233c (family_assigned) — Possible triacylglycerol synthase (diacylglycerol Rv3233c pks13 (requalified) — polyketide synthase Pks13 pks13 nuoC (family_assigned) — NADH-quinone oxidoreductase subunit C nuoC nuoD (family_assigned) — NADH dehydrogenase (quinone) subunit D nuoD nuoB (family_assigned) — NADH-quinone oxidoreductase subunit B nuoB cmr (family_assigned) — HTH-type transcriptional regulator Cmr cmr mftR (family_assigned) — mycofactocin system transcriptional regulator mftR Rv3840 (family_assigned) — transcriptional regulator Rv3840 oxyS (family_assigned) — LysR family transcriptional regulator OxyS oxyS Rv1674c (family_assigned) — metalloregulator ArsR/SmtB family transcription fa Rv1674c Rv3736 (family_assigned) — AraC family transcriptional regulator Rv3736 rpsG (requalified) — 30S ribosomal protein S7 rpsG rpsD (requalified) — 30S ribosomal protein S4 rpsD rplW (requalified) — 50S ribosomal protein L23 rplW rpsF (requalified) — 30S ribosomal protein S6 rpsF rplP (requalified) — 50S ribosomal protein L16 rplP rpsS (requalified) — 30S ribosomal protein S19 rpsS nlhH (family_assigned) — alpha/beta hydrolase nlhH mbtJ (requalified) — acetyl hydrolase mbtJ Rv1401 (family_assigned) — membrane protein Rv1401 priA (family_assigned) — primosomal protein N' priA vapB10 (family_assigned) — CopG family transcriptional regulator vapB10 Rv2969c (requalified) — mycothiol-dependent reductase Rv2969c Rv2968c (family_assigned) — vitamin K epoxide reductase family protein Rv2968c Rv2970A (family_assigned) — hypothetical protein Rv2970A pca (requalified) — pyruvate carboxylase pca Rv2971 (requalified) — aldo/keto reductase Rv2971

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.