MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv2248 · 46 genes shown · anchor rsmA · open gene page → · ← back to 1 hop

Evidence: Min score 0
Rv2248 (family_assigned) — hypothetical protein Rv2248 rsmA (requalified) — anti-sigma-M factor RsmA rsmA Rv3779 (family_assigned) — DUF6541 family protein Rv3779 Rv0204c (family_assigned) — TIGR00374 family protein Rv0204c Rv0955 (family_assigned) — DUF6350 family protein Rv0955 Rv1353c (family_assigned) — TetR/AcrR family transcriptional regulator C-termi Rv1353c kasB (requalified) — 3-oxoacyl-ACP synthase 2 kasB Rv0048c (family_assigned) — DUF1707 domain-containing protein Rv0048c gltB (family_assigned) — glutamate synthase large subunit gltB PPE2 (family_assigned) — PPE family protein PPE2 PPE2 Rv1060 (family_assigned) — SRPBCC family protein Rv1060 Rv3773c (family_assigned) — TIGR03086 family metal-binding protein Rv3773c mbtG (requalified) — NADPH-dependent L-lysine N(6)-monooxygenase MbtG mbtG sigM (requalified) — ECF RNA polymerase sigma factor SigM sigM Rv3909 (dark) — hypothetical protein Rv3909 murJ (requalified) — murein biosynthesis integral membrane protein MurJ murJ mutT4 (requalified) — NUDIX hydrolase mutT4 trxC (requalified) — thioredoxin trxC trxB2 (requalified) — thioredoxin-disulfide reductase trxB2 rfbE (family_assigned) — ABC transporter ATP-binding protein rfbE bpa (requalified) — proteasome activator protein Bpa bpa rfbD (family_assigned) — ABC transporter permease rfbD glfT1 (requalified) — galactofuranosyl transferase GlfT glfT1 Rv3632 (family_assigned) — DUF2304 domain-containing protein Rv3632 Rv0205 (family_assigned) — AI-2E family transporter Rv0205 Rv0128 (family_assigned) — YoaK family protein Rv0128 aftD (family_assigned) — DUF3367 domain-containing protein aftD Rv1978 (requalified) — class I SAM-dependent methyltransferase Rv1978 Rv0954 (requalified) — DUF5336 domain-containing protein Rv0954 Rv3604c (dark) — DUF6779 domain-containing protein Rv3604c purN (requalified) — phosphoribosylglycinamide formyltransferase purN purH (requalified) — bifunctional phosphoribosylaminoimidazolecarboxami purH pimE (requalified) — mannosyltransferase pimE Rv1354c (requalified) — bifunctional diguanylate cyclase/phosphodiesterase Rv1354c moeY (family_assigned) — Rv1355c family protein moeY Rv1356c (requalified) — hypothetical protein Rv1356c Rv1358 (family_assigned) — LuxR C-terminal-related transcriptional regulator Rv1358 Rv0895 (requalified) — diacyglycerol O-acyltransferase Rv0895 Rv0875c (dark) — DUF2771 domain-containing protein Rv0875c fabD (requalified) — malonyl CoA-acyl carrier protein transacylase fabD kasA (requalified) — 3-oxoacyl-ACP synthase KasA kasA accD6 (family_assigned) — acyl-CoA carboxylase subunit beta accD6 accD3 (family_assigned) — carboxyl transferase domain-containing protein accD3 acpM (requalified) — meromycolate extension acyl carrier protein AcpM acpM fabH (requalified) — beta-ketoacyl-ACP synthase III fabH Rv1171 (family_assigned) — hypothetical protein Rv1171

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.