MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv2232 · 46 genes shown · anchor ptpA · open gene page → · ← back to 1 hop

Evidence: Min score 0
ptkA (family_assigned) — protein tyrosine kinase transcriptional regulator ptkA ptpA (requalified) — protein-tyrosine-phosphatase ptpA Rv2235 (family_assigned) — SURF1 family protein Rv2235 cobC (requalified) — aminotransferase cobC Rv2230c (requalified) — Nif3-like dinuclear metal center hexameric protein Rv2230c Rv2229c (family_assigned) — zinc ribbon domain-containing protein Rv2229c Rv2228c (requalified) — multifunctional RNASE H/alpha-ribazole phosphatase Rv2228c vapC16 (requalified) — ribonuclease VapC16 vapC16 atpH (family_assigned) — F0F1 ATP synthase subunit B/delta atpH rpe (requalified) — ribulose-phosphate 3-epimerase rpe Rv3197 (family_assigned) — AarF/ABC1/UbiB kinase family protein Rv3197 Rv0647c (family_assigned) — hypothetical protein Rv0647c pta (requalified) — phosphate acetyltransferase pta ptbB (requalified) — tyrosine-protein phosphatase PtbB ptbB Rv1456c (requalified) — heme A synthase Rv1456c hisB (requalified) — imidazoleglycerol-phosphate dehydratase HisB hisB tyrA (requalified) — prephenate dehydrogenase TyrA tyrA cobB (requalified) — cobyrinate a%2Cc-diamide synthase cobB cobQ1 (requalified) — cobyric acid synthase cobQ1 hisC1 (requalified) — histidinol-phosphate aminotransferase hisC1 cobS (requalified) — adenosylcobinamide-GDP ribazoletransferase cobS cobT (requalified) — nicotinate-nucleotide--dimethylbenzimidazole phosp cobT ssb (family_assigned) — single-stranded DNA-binding protein ssb Rv2308 (family_assigned) — DUF433 domain-containing protein Rv2308 PPE8 (family_assigned) — PPE family protein PPE8 PPE8 PPE56 (family_assigned) — PPE family protein PPE56 PPE56 PPE55 (family_assigned) — PPE family protein PPE55 PPE55 PPE34 (family_assigned) — PPE family protein PPE34 PPE34 PPE5 (family_assigned) — PPE family protein PPE5 PPE5 atpF (family_assigned) — F0F1 ATP synthase subunit B atpF atpG (family_assigned) — F0F1 ATP synthase subunit gamma atpG atpA (family_assigned) — F0F1 ATP synthase subunit alpha atpA atpD (family_assigned) — F0F1 ATP synthase subunit beta atpD atpC (family_assigned) — F0F1 ATP synthase subunit epsilon atpC atpE (family_assigned) — F0F1 ATP synthase subunit C atpE tkt (requalified) — transketolase tkt gnd1 (requalified) — 6-phosphogluconate dehydrogenase gnd1 rpiB (requalified) — ribose-5-phosphate isomerase B rpiB xylB (requalified) — FGGY-family carbohydrate kinase xylB gnd2 (requalified) — decarboxylating 6-phosphogluconate dehydrogenase gnd2 fmu (requalified) — 16S rRNA m5C967 methyltransferase fmu phoY2 (requalified) — phosphate signaling complex protein PhoU phoY2 TB16.3 (family_assigned) — SRPBCC family protein TB16.3 Rv0854 (family_assigned) — SRPBCC family protein Rv0854 Rv0474 (family_assigned) — helix-turn-helix transcriptional regulator Rv0474 Rv0857 (family_assigned) — hypothetical protein Rv0857

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.