MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv2230c · 46 genes shown · anchor cobC · open gene page → · ← back to 1 hop

Evidence: Min score 0
Rv2230c (requalified) — Nif3-like dinuclear metal center hexameric protein Rv2230c cobC (requalified) — aminotransferase cobC Rv2229c (family_assigned) — zinc ribbon domain-containing protein Rv2229c Rv2228c (requalified) — multifunctional RNASE H/alpha-ribazole phosphatase Rv2228c ptpA (requalified) — protein-tyrosine-phosphatase ptpA Rv2235 (family_assigned) — SURF1 family protein Rv2235 ptkA (family_assigned) — protein tyrosine kinase transcriptional regulator ptkA vapC16 (requalified) — ribonuclease VapC16 vapC16 polA (requalified) — DNA polymerase I polA Rv1747 (family_assigned) — ATP-binding cassette domain-containing protein Rv1747 coaE (requalified) — dephospho-CoA kinase coaE Rv3722c (requalified) — aminotransferase Rv3722c dnaG (requalified) — DNA primase dnaG hisB (requalified) — imidazoleglycerol-phosphate dehydratase HisB hisB tyrA (requalified) — prephenate dehydrogenase TyrA tyrA cobB (requalified) — cobyrinate a%2Cc-diamide synthase cobB cobQ1 (requalified) — cobyric acid synthase cobQ1 hisC1 (requalified) — histidinol-phosphate aminotransferase hisC1 cobS (requalified) — adenosylcobinamide-GDP ribazoletransferase cobS cobT (requalified) — nicotinate-nucleotide--dimethylbenzimidazole phosp cobT ssb (family_assigned) — single-stranded DNA-binding protein ssb ptbB (requalified) — tyrosine-protein phosphatase PtbB ptbB Rv1456c (requalified) — heme A synthase Rv1456c Rv2308 (family_assigned) — DUF433 domain-containing protein Rv2308 PPE8 (family_assigned) — PPE family protein PPE8 PPE8 PPE56 (family_assigned) — PPE family protein PPE56 PPE56 PPE55 (family_assigned) — PPE family protein PPE55 PPE55 PPE34 (family_assigned) — PPE family protein PPE34 PPE34 PPE5 (family_assigned) — PPE family protein PPE5 PPE5 dnaN (family_assigned) — DNA polymerase III subunit beta dnaN lppK (family_assigned) — hypothetical protein lppK recA (requalified) — intein-containing recombinase RecA recA Rv1277 (family_assigned) — hypothetical protein Rv1277 Rv2529 (family_assigned) — hypothetical protein Rv2529 Rv1278 (family_assigned) — AAA family ATPase Rv1278 Rv1248c (family_assigned) — multifunctional oxoglutarate decarboxylase/oxoglut Rv1248c pknB (family_assigned) — Stk1 family PASTA domain-containing Ser/Thr kinase pknB pknF (requalified) — serine/threonine protein kinase PknF pknF Rv1364c (family_assigned) — sigma factor regulatory protein Rv1364c kdtB (requalified) — pantetheine-phosphate adenylyltransferase kdtB acpS (requalified) — holo-ACP synthase acpS rpsA (requalified) — 30S ribosomal protein S1 rpsA Rv1870c (family_assigned) — hypothetical protein Rv1870c rnhB (requalified) — ribonuclease HII rnhB dnaZX (family_assigned) — DNA polymerase III subunits gamma/tau dnaZX lucA (requalified) — lipid uptake coordinator LucA lucA

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.