MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv2229c · 46 genes shown · open gene page → · ← back to 1 hop

Evidence: Min score 0
Rv2229c (family_assigned) — zinc ribbon domain-containing protein Rv2229c Rv2228c (requalified) — multifunctional RNASE H/alpha-ribazole phosphatase Rv2228c Rv2230c (requalified) — Nif3-like dinuclear metal center hexameric protein Rv2230c cobC (requalified) — aminotransferase cobC Rv2235 (family_assigned) — SURF1 family protein Rv2235 ptpA (requalified) — protein-tyrosine-phosphatase ptpA ptkA (family_assigned) — protein tyrosine kinase transcriptional regulator ptkA vapC16 (requalified) — ribonuclease VapC16 vapC16 Rv2169c (dark) — DUF3040 domain-containing protein Rv2169c Rv2199c (family_assigned) — cytochrome c oxidase subunit 4 Rv2199c qcrA (requalified) — hypothetical protein qcrA Rv2256c (dark) — hypothetical protein Rv2256c Rv3015c (requalified) — methionine synthase Rv3015c cobS (requalified) — adenosylcobinamide-GDP ribazoletransferase cobS cobT (requalified) — nicotinate-nucleotide--dimethylbenzimidazole phosp cobT ssb (family_assigned) — single-stranded DNA-binding protein ssb hisB (requalified) — imidazoleglycerol-phosphate dehydratase HisB hisB tyrA (requalified) — prephenate dehydrogenase TyrA tyrA cobB (requalified) — cobyrinate a%2Cc-diamide synthase cobB cobQ1 (requalified) — cobyric acid synthase cobQ1 hisC1 (requalified) — histidinol-phosphate aminotransferase hisC1 Rv1456c (requalified) — heme A synthase Rv1456c ptbB (requalified) — tyrosine-protein phosphatase PtbB ptbB Rv2308 (family_assigned) — DUF433 domain-containing protein Rv2308 PPE8 (family_assigned) — PPE family protein PPE8 PPE8 PPE56 (family_assigned) — PPE family protein PPE56 PPE56 PPE55 (family_assigned) — PPE family protein PPE55 PPE55 PPE34 (family_assigned) — PPE family protein PPE34 PPE34 PPE5 (family_assigned) — PPE family protein PPE5 PPE5 Rv2170 (requalified) — N-acetyltransferase Rv2170 Rv2680 (dark) — DUF3000 domain-containing protein Rv2680 qcrC (requalified) — cytochrome c qcrC Rv2146c (family_assigned) — YggT family protein Rv2146c ctaD (family_assigned) — cytochrome c oxidase subunit I ctaD ctaC (family_assigned) — cytochrome c oxidase subunit II ctaC ctaE (family_assigned) — heme-copper oxidase subunit III ctaE qcrB (family_assigned) — cytochrome bc complex cytochrome b subunit qcrB Rv2257c (family_assigned) — serine hydrolase domain-containing protein Rv2257c Rv2699c (dark) — DUF4193 domain-containing protein Rv2699c Rv2413c (family_assigned) — DNA polymerase III subunit delta Rv2413c Rv2033c (family_assigned) — DUF3097 domain-containing protein Rv2033c lpqA (family_assigned) — sensor domain-containing protein lpqA Rv2172c (requalified) — mycobacterial-type methylenetetrahydrofolate reduc Rv2172c ligA (requalified) — NAD-dependent DNA ligase LigA ligA metK (requalified) — S-adenosylmethionine synthetase metK ldtMt3 (requalified) — L%2CD-transpeptidase LdtMt3 ldtMt3

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.