MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv2224c · 42 genes shown · anchor glnA2 · open gene page → · ← back to 1 hop

Evidence: Min score 0
caeA (requalified) — carboxylesterase CaeA caeA glnA2 (family_assigned) — glutamine synthetase family protein glnA2 glnE (requalified) — bifunctional [glutamine synthetase] adenylyltransf glnE caeB (requalified) — carboxylesterase CaeB caeB Rv2256c (dark) — hypothetical protein Rv2256c mas (requalified) — mycocerosate synthase mas pks2 (requalified) — phthioceranic/hydroxyphthioceranic acid synthase pks2 ppsC (requalified) — phthiocerol type I polyketide synthase PpsC ppsC pks12 (requalified) — type I polyketide synthase pks12 pks5 (requalified) — sulfolipid-1 biosynthesis phthioceranic/hydroxypht pks5 pks1 (requalified) — polyketide synthase pks1 pks7 (requalified) — type I polyketide synthase pks7 pks4 (requalified) — polyketide beta-ketoacyl synthase pks4 gltB (family_assigned) — glutamate synthase large subunit gltB glmS (requalified) — glutamine--fructose-6-phosphate transaminase (isom glmS carA (family_assigned) — glutamine-hydrolyzing carbamoyl-phosphate synthase carA carB (family_assigned) — carbamoyl-phosphate synthase large subunit carB gltD (family_assigned) — glutamate synthase subunit beta gltD purF (requalified) — amidophosphoribosyltransferase purF rbpA (family_assigned) — RNA polymerase-binding protein RbpA rbpA Rv2681 (requalified) — ribonuclease D Rv2681 glnA1 (requalified) — type I glutamate--ammonia ligase glnA1 Rv2146c (family_assigned) — YggT family protein Rv2146c Rv2257c (family_assigned) — serine hydrolase domain-containing protein Rv2257c Rv2699c (dark) — DUF4193 domain-containing protein Rv2699c Rv2680 (dark) — DUF3000 domain-containing protein Rv2680 Rv2413c (family_assigned) — DNA polymerase III subunit delta Rv2413c Rv2033c (family_assigned) — DUF3097 domain-containing protein Rv2033c fas (requalified) — fatty acid synthase fas fabD (requalified) — malonyl CoA-acyl carrier protein transacylase fabD mbtB (requalified) — phenyloxazoline synthase MbtB mbtB papA1 (requalified) — acyltransferase PapA1 papA1 ppsE (requalified) — phthiocerol type I polyketide synthase PpsE ppsE ppsD (requalified) — phthiocerol type I polyketide synthase PpsD ppsD ppsB (requalified) — phthiocerol type I polyketide synthase PpsB ppsB pks15 (requalified) — polyketide synthase pks15 mbtC (requalified) — polyketide synthetase MbtC mbtC pks8 (requalified) — polyketide synthase pks8 pks9 (requalified) — type I polyketide synthase pks9 pks17 (requalified) — polyketide synthase pks17 pks3 (requalified) — polyketide beta-ketoacyl synthase pks3 papA3 (requalified) — acyltransferase PapA3 papA3

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.