MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv2221c · 46 genes shown · anchor glnA2 · open gene page → · ← back to 1 hop

Evidence: Min score 0
glnE (requalified) — bifunctional [glutamine synthetase] adenylyltransf glnE glnA2 (family_assigned) — glutamine synthetase family protein glnA2 caeB (requalified) — carboxylesterase CaeB caeB rbpA (family_assigned) — RNA polymerase-binding protein RbpA rbpA caeA (requalified) — carboxylesterase CaeA caeA Rv2681 (requalified) — ribonuclease D Rv2681 glnA1 (requalified) — type I glutamate--ammonia ligase glnA1 Rv1830 (family_assigned) — HTH-type transcriptional regulator Rv1830 Rv2699c (dark) — DUF4193 domain-containing protein Rv2699c Rv2219 (family_assigned) — DUF4191 domain-containing protein Rv2219 Rv2413c (family_assigned) — DNA polymerase III subunit delta Rv2413c gltB (family_assigned) — glutamate synthase large subunit gltB Rv0807 (family_assigned) — sterol carrier family protein Rv0807 glmS (requalified) — glutamine--fructose-6-phosphate transaminase (isom glmS carA (family_assigned) — glutamine-hydrolyzing carbamoyl-phosphate synthase carA carB (family_assigned) — carbamoyl-phosphate synthase large subunit carB gltD (family_assigned) — glutamate synthase subunit beta gltD purF (requalified) — amidophosphoribosyltransferase purF Rv2256c (dark) — hypothetical protein Rv2256c pks5 (requalified) — sulfolipid-1 biosynthesis phthioceranic/hydroxypht pks5 pks2 (requalified) — phthioceranic/hydroxyphthioceranic acid synthase pks2 rpoA (family_assigned) — DNA-directed RNA polymerase subunit alpha rpoA rpoZ (family_assigned) — DNA-directed RNA polymerase subunit omega rpoZ sigA (requalified) — RNA polymerase sigma factor sigA rpoC (family_assigned) — DNA-directed RNA polymerase subunit beta' rpoC rpoB (family_assigned) — DNA-directed RNA polymerase subunit beta rpoB sigB (family_assigned) — sigma-70 family RNA polymerase sigma factor SigB sigB mas (requalified) — mycocerosate synthase mas rphA (requalified) — ribonuclease PH rphA rpsA (requalified) — 30S ribosomal protein S1 rpsA Rv2680 (dark) — DUF3000 domain-containing protein Rv2680 rpsD (requalified) — 30S ribosomal protein S4 rpsD rpsK (requalified) — 30S ribosomal protein S11 rpsK rplD (requalified) — 50S ribosomal protein L4 rplD rocA (requalified) — L-glutamate gamma-semialdehyde dehydrogenase rocA secG (family_assigned) — preprotein translocase subunit SecG secG whiB2 (family_assigned) — transcriptional regulator WhiB2 whiB2 whiB1 (family_assigned) — transcriptional regulator WhiB1 whiB1 whiA (family_assigned) — DNA-binding protein WhiA whiA Rv2239c (family_assigned) — hypothetical protein Rv2239c cei (requalified) — envelope integrity protein Cei cei lipB (requalified) — lipoyl(octanoyl) transferase LipB lipB lipA (requalified) — lipoyl synthase lipA Rv2216 (family_assigned) — TIGR01777 family oxidoreductase Rv2216 dlaT (requalified) — 2-oxoglutarate dehydrogenase%2C E2 component%2C di dlaT Rv2708c (family_assigned) — hypothetical protein Rv2708c

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.