MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv2216 · 46 genes shown · anchor dlaT · open gene page → · ← back to 1 hop

Evidence: Min score 0
Rv2216 (family_assigned) — TIGR01777 family oxidoreductase Rv2216 dlaT (requalified) — 2-oxoglutarate dehydrogenase%2C E2 component%2C di dlaT lipB (requalified) — lipoyl(octanoyl) transferase LipB lipB lipA (requalified) — lipoyl synthase lipA Rv2219 (family_assigned) — DUF4191 domain-containing protein Rv2219 arcA (requalified) — arginine deiminase arcA ephD (family_assigned) — SDR family oxidoreductase ephD Rv1155 (requalified) — PPOX class F420-dependent oxidoreductase Rv1155 Rv2074 (requalified) — F420-dependent biliverdin reductase Rv2074 Rv3369 (family_assigned) — hypothetical protein Rv3369 Rv2991 (requalified) — PPOX class F420-dependent oxidoreductase Rv2991 Rv0318c (family_assigned) — integral membrane protein Rv0318c hemZ (requalified) — ferrochelatase hemZ lpdC (requalified) — dihydrolipoyl dehydrogenase lpdC Rv1248c (family_assigned) — multifunctional oxoglutarate decarboxylase/oxoglut Rv1248c bkdB (family_assigned) — 3-methyl-2-oxobutanoate dehydrogenase subunit beta bkdB aceE (requalified) — pyruvate dehydrogenase E1 component aceE sucC (family_assigned) — ADP-forming succinate--CoA ligase subunit beta sucC bkdA (family_assigned) — pyruvate dehydrogenase (acetyl-transferring) E1 co bkdA gcvH (requalified) — glycine cleavage system protein GcvH gcvH fas (requalified) — fatty acid synthase fas bkdC (family_assigned) — dihydrolipoamide acetyltransferase family protein bkdC Rv2708c (family_assigned) — hypothetical protein Rv2708c Rv1830 (family_assigned) — HTH-type transcriptional regulator Rv1830 argF (requalified) — ornithine carbamoyltransferase argF argH (requalified) — argininosuccinate lyase argH argG (requalified) — argininosuccinate synthase argG Rv2531c (requalified) — amino acid decarboxylase Rv2531c Rv1000c (family_assigned) — hypothetical protein Rv1000c pks12 (requalified) — type I polyketide synthase pks12 mas (requalified) — mycocerosate synthase mas pks2 (requalified) — phthioceranic/hydroxyphthioceranic acid synthase pks2 ppsC (requalified) — phthiocerol type I polyketide synthase PpsC ppsC pks5 (requalified) — sulfolipid-1 biosynthesis phthioceranic/hydroxypht pks5 Rv3549c (family_assigned) — SDR family oxidoreductase Rv3549c Rv1875 (requalified) — PPOX class F420-dependent oxidoreductase Rv1875 Rv1154c (family_assigned) — hypothetical protein Rv1154c Rv3463 (requalified) — LLM class F420-dependent oxidoreductase Rv3463 omt (requalified) — class I SAM-dependent methyltransferase omt Rv1156 (requalified) — HhH-GPD-type base excision DNA repair protein Rv1156 Rv2073c (family_assigned) — SDR family NAD(P)-dependent oxidoreductase Rv2073c cobK (requalified) — cobalt-precorrin-6A reductase cobK cobM (requalified) — precorrin-4 C(11)-methyltransferase cobM cobL (requalified) — bifunctional cobalt-precorrin-7 (C(5))-methyltrans cobL Rv3368c (family_assigned) — nitroreductase family protein Rv3368c Rv1770 (family_assigned) — hypothetical protein Rv1770

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.