MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv2207 · 37 genes shown · anchor cobU · open gene page → · ← back to 1 hop

Evidence: Min score 0
cobT (requalified) — nicotinate-nucleotide--dimethylbenzimidazole phosp cobT cobU (requalified) — bifunctional adenosylcobinamide kinase/adenosylcob cobU cobS (requalified) — adenosylcobinamide-GDP ribazoletransferase cobS bluB (requalified) — 5%2C6-dimethylbenzimidazole synthase bluB Rv2228c (requalified) — multifunctional RNASE H/alpha-ribazole phosphatase Rv2228c cobB (requalified) — cobyrinate a%2Cc-diamide synthase cobB cobQ1 (requalified) — cobyric acid synthase cobQ1 cobD (requalified) — cobalamin biosynthesis protein cobD Rv2206 (family_assigned) — DUF3043 domain-containing protein Rv2206 Rv2205c (requalified) — glycerate kinase Rv2205c cobIJ (requalified) — precorrin-2 C(20)-methyltransferase cobIJ cobM (requalified) — precorrin-4 C(11)-methyltransferase cobM Rv2204c (requalified) — iron-sulfur cluster assembly accessory protein Rv2204c cobO (requalified) — cob(I)alamin adenosyltransferase cobO Rv1314c (requalified) — cob(I)yrinic acid a%2Cc-diamide adenosyltransferas Rv1314c Rv0296c (requalified) — sulfatase Rv0296c Rv0307c (family_assigned) — hypothetical protein Rv0307c Rv0295c (family_assigned) — Stf0 family sulfotransferase Rv0295c Rv2229c (family_assigned) — zinc ribbon domain-containing protein Rv2229c Rv2230c (requalified) — Nif3-like dinuclear metal center hexameric protein Rv2230c cobC (requalified) — aminotransferase cobC ssb (family_assigned) — single-stranded DNA-binding protein ssb cobH (requalified) — precorrin-8X methylmutase cobH cobN (family_assigned) — cobaltochelatase subunit CobN cobN Rv2699c (dark) — DUF4193 domain-containing protein Rv2699c rbpA (family_assigned) — RNA polymerase-binding protein RbpA rbpA aldA (requalified) — aldehyde dehydrogenase aldA Rv0147 (requalified) — aldehyde dehydrogenase Rv0147 Rv0223c (requalified) — aldehyde dehydrogenase Rv0223c pcd (requalified) — piperideine-6-carboxylic acid dehydrogenase pcd gpm1 (requalified) — 2,3-bisphosphoglycerate-dependent phosphoglycerate gpm1 cobK (requalified) — cobalt-precorrin-6A reductase cobK cobL (requalified) — bifunctional cobalt-precorrin-7 (C(5))-methyltrans cobL cobG (requalified) — precorrin-3B synthase cobG Rv1465 (family_assigned) — SUF system NifU family Fe-S cluster assembly prote Rv1465 iscS (family_assigned) — cysteine desulfurase family protein iscS nrdH (requalified) — redoxin NrdH nrdH

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.