MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv2204c · 46 genes shown · open gene page → · ← back to 1 hop

Evidence: Min score 0
Rv2204c (requalified) — iron-sulfur cluster assembly accessory protein Rv2204c Rv1465 (family_assigned) — SUF system NifU family Fe-S cluster assembly prote Rv1465 Rv2205c (requalified) — glycerate kinase Rv2205c iscS (family_assigned) — cysteine desulfurase family protein iscS nrdH (requalified) — redoxin NrdH nrdH Rv2206 (family_assigned) — DUF3043 domain-containing protein Rv2206 cobT (requalified) — nicotinate-nucleotide--dimethylbenzimidazole phosp cobT cobS (requalified) — adenosylcobinamide-GDP ribazoletransferase cobS sufC (requalified) — Fe-S cluster assembly ATPase SufC sufC prfA (requalified) — peptide chain release factor 1 prfA Rv1248c (family_assigned) — multifunctional oxoglutarate decarboxylase/oxoglut Rv1248c sufD (requalified) — Fe-S cluster assembly protein SufD sufD sufB (requalified) — intein-containing Fe-S cluster assembly protein Su sufB csd (requalified) — cysteine desulfurase csd Rv1466 (requalified) — metal-sulfur cluster assembly factor Rv1466 aldA (requalified) — aldehyde dehydrogenase aldA Rv0147 (requalified) — aldehyde dehydrogenase Rv0147 Rv0223c (requalified) — aldehyde dehydrogenase Rv0223c pcd (requalified) — piperideine-6-carboxylic acid dehydrogenase pcd gpm1 (requalified) — 2,3-bisphosphoglycerate-dependent phosphoglycerate gpm1 moeB1 (requalified) — adenylyltransferase/sulfurtransferase MoeZ moeB1 moeB2 (requalified) — molybdenum cofactor biosynthesis protein MoeB moeB2 trmU (requalified) — tRNA 2-thiouridine(34) synthase MnmA trmU sseB (requalified) — sulfurtransferase sseB cysA2 (requalified) — sulfurtransferase cysA2 nrdE (family_assigned) — ribonucleoside-diphosphate reductase subunit alpha nrdE nrdI (requalified) — class Ib ribonucleoside-diphosphate reductase asse nrdI nrdZ (requalified) — adenosylcobalamin-dependent ribonucleoside-diphosp nrdZ nrdF2 (family_assigned) — ribonucleoside-diphosphate reductase subunit beta nrdF2 nrdF1 (family_assigned) — ribonucleoside-diphosphate reductase subunit beta nrdF1 Rv3050c (family_assigned) — TetR/AcrR family transcriptional regulator Rv3050c Rv2699c (dark) — DUF4193 domain-containing protein Rv2699c rbpA (family_assigned) — RNA polymerase-binding protein RbpA rbpA cobU (requalified) — bifunctional adenosylcobinamide kinase/adenosylcob cobU bluB (requalified) — 5%2C6-dimethylbenzimidazole synthase bluB Rv2228c (requalified) — multifunctional RNASE H/alpha-ribazole phosphatase Rv2228c cobB (requalified) — cobyrinate a%2Cc-diamide synthase cobB cobQ1 (requalified) — cobyric acid synthase cobQ1 cobIJ (requalified) — precorrin-2 C(20)-methyltransferase cobIJ cobO (requalified) — cob(I)alamin adenosyltransferase cobO Rv1314c (requalified) — cob(I)yrinic acid a%2Cc-diamide adenosyltransferas Rv1314c Rv3778c (family_assigned) — cysteine desulfurase-like protein Rv3778c hemK (requalified) — peptide chain release factor N(5)-glutamine methyl hemK rplM (requalified) — 50S ribosomal protein L13 rplM rplT (requalified) — 50S ribosomal protein L20 rplT rpmE (requalified) — 50S ribosomal protein L31 rpmE

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.