MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv2178c · 46 genes shown · open gene page → · ← back to 1 hop

Evidence: Min score 0
aroG (requalified) — 3-deoxy-7-phosphoheptulonate synthase class II aroG Rv0948c (requalified) — chorismate mutase Rv0948c aroB (requalified) — 3-dehydroquinate synthase aroB Rv2179c (requalified) — polyadenylate-specific 3'-exoribonuclease AS Rv2179c Rv2180c (family_assigned) — integral membrane protein Rv2180c Rv2181 (requalified) — alpha-(1-2)-phosphatidylinositol mannoside mannosy Rv2181 Rv1885c (requalified) — chorismate mutase Rv1885c Rv2177c (requalified) — transposase Rv2177c trpG (requalified) — anthranilate synthase component II trpG aroE (requalified) — shikimate dehydrogenase aroE Rv2175c (family_assigned) — DNA-binding protein Rv2175c aroF (requalified) — chorismate synthase aroF aroA (requalified) — 3-phosphoshikimate 1-carboxyvinyltransferase aroA tyrA (requalified) — prephenate dehydrogenase TyrA tyrA pheA (requalified) — prephenate dehydratase pheA trpE (requalified) — anthranilate synthase component I trpE aroK (requalified) — shikimate kinase AroK aroK aroD (requalified) — type II 3-dehydroquinate dehydratase aroD 35kd_ag (family_assigned) — hypothetical protein 35kd_ag Rv2468c (requalified) — hypothetical protein Rv2468c Rv2728c (family_assigned) — hypothetical protein Rv2728c Rv0037c (requalified) — MFS transporter Rv0037c Rv0585c (family_assigned) — lysylphosphatidylglycerol synthase transmembrane d Rv0585c rsmA (requalified) — anti-sigma-M factor RsmA rsmA aftD (family_assigned) — DUF3367 domain-containing protein aftD Rv0955 (family_assigned) — DUF6350 family protein Rv0955 fbpB (requalified) — diacylglycerol acyltransferase/mycolyltransferase fbpB Rv2424c (requalified) — transposase Rv2424c Rv0071 (family_assigned) — reverse transcriptase domain-containing protein Rv0071 Rv3428c (requalified) — transposase Rv3428c Rv1005c (requalified) — para-aminobenzoate synthase component I Rv1005c trpD (requalified) — anthranilate phosphoribosyltransferase trpD trpC (requalified) — indole-3-glycerol phosphate synthase TrpC trpC mbtI (requalified) — salicylate synthase mbtI trpB (family_assigned) — tryptophan synthase subunit beta trpB mltG (requalified) — endolytic transglycosylase MltG mltG Rv2551c (family_assigned) — A24 family peptidase Rv2551c sirR (family_assigned) — manganese-binding transcriptional regulator MntR sirR pknL (requalified) — protein kinase pknL Rv1773c (family_assigned) — IclR family transcriptional regulator Rv1773c cobB (requalified) — NAD-dependent protein deacylase cobB Rv0603 (family_assigned) — hypothetical protein Rv0603 Rv1725c (family_assigned) — winged helix-turn-helix transcriptional regulator Rv1725c Rv2455c (family_assigned) — 2-oxoacid:acceptor oxidoreductase subunit alpha Rv2455c cmk (requalified) — (d)CMP kinase cmk rsgA (family_assigned) — ribosome small subunit-dependent GTPase A rsgA

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.