MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv2172c · 46 genes shown · anchor idsA2 · open gene page → · ← back to 1 hop

Evidence: Min score 0
Rv2172c (requalified) — mycobacterial-type methylenetetrahydrofolate reduc Rv2172c metH (requalified) — methionine synthase metH metE (requalified) — 5-methyltetrahydropteroyltriglutamate--homocystein metE Rv3015c (requalified) — methionine synthase Rv3015c idsA2 (requalified) — bifunctional (2E%2C6E)-farnesyl/geranyl diphosphat idsA2 metZ (requalified) — O-succinylhomoserine sulfhydrylase metZ metB (requalified) — cystathionine gamma-synthase metB metK (requalified) — S-adenosylmethionine synthetase metK embC (requalified) — arabinosyltransferase EmbC embC lmeA (requalified) — mannan chain length control protein LmeA lmeA gltB (family_assigned) — glutamate synthase large subunit gltB Rv1610 (family_assigned) — TIGR02234 family membrane protein Rv1610 embB (requalified) — arabinosyltransferase EmbB embB metC (requalified) — bifunctional o-acetylhomoserine/o-acetylserine sul metC sahH (requalified) — adenosylhomocysteinase sahH lpqA (family_assigned) — sensor domain-containing protein lpqA ligA (requalified) — NAD-dependent DNA ligase LigA ligA ldtMt3 (requalified) — L%2CD-transpeptidase LdtMt3 ldtMt3 Rv0192 (family_assigned) — hypothetical protein Rv0192 Rv1086 (family_assigned) — undecaprenyl diphosphate synthase family protein Rv1086 idi (requalified) — isopentenyl-diphosphate Delta-isomerase idi grcC1 (requalified) — polyprenyl-diphosphate synthase GrcC grcC1 grcC2 (requalified) — polyprenyl-diphosphate synthase GrcC grcC2 idsB (family_assigned) — polyprenyl synthetase family protein idsB idsA1 (requalified) — multifunctional dimethylallyltransferase/geranyltr idsA1 cbs (requalified) — cystathionine beta-synthase cbs cysK1 (requalified) — O-acetylserine sulfhydrylase cysK1 Rv3684 (requalified) — lyase Rv3684 ribH (requalified) — 6%2C7-dimethyl-8-ribityllumazine synthase ribH mscL (requalified) — large-conductance mechanosensitive channel protein mscL mmuM (requalified) — homocysteine S-methyltransferase mmuM gmk (requalified) — guanylate kinase gmk acpM (requalified) — meromycolate extension acyl carrier protein AcpM acpM aftA (requalified) — galactan 5-O-arabinofuranosyltransferase aftA Rv3789 (requalified) — arabinogalactan biosynthesis protein Rv3789 dprE1 (requalified) — decaprenylphospho-beta-D-ribofuranose 2-dehydrogen dprE1 dprE2 (requalified) — decaprenylphosphoryl-D-2-keto erythropentose reduc dprE2 embA (requalified) — arabinosyltransferase EmbA embA thiX (family_assigned) — thioredoxin family protein thiX ttfA (requalified) — trehalose monomycolate transport factor TtfA ttfA hbhA (requalified) — heparin-binding hemagglutinin HbhA hbhA eccD3 (family_assigned) — type VII secretion system ESX-3 subunit EccD3 eccD3 lprC (family_assigned) — DUF3558 domain-containing protein lprC Rv2743c (family_assigned) — hypothetical protein Rv2743c gltD (family_assigned) — glutamate synthase subunit beta gltD fprA (requalified) — ferredoxin--NADP(+) reductase FprA fprA

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.