MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv2160c · 46 genes shown · open gene page → · ← back to 1 hop

Evidence: Min score 0
Rv2160c (family_assigned) — Conserved hypothetical protein Rv2160c Rv2160A (family_assigned) — Conserved hypothetical protein Rv2160A Rv2161c (family_assigned) — TIGR03619 family F420-dependent LLM class oxidored Rv2161c Rv2159c (family_assigned) — carboxymuconolactone decarboxylase family protein Rv2159c Rv2558 (family_assigned) — hypothetical protein Rv2558 Rv2557 (family_assigned) — hypothetical protein Rv2557 Rv2275 (requalified) — cyclo(L-tyrosyl-L-tyrosyl) synthase Rv2275 pth (requalified) — aminoacyl-tRNA hydrolase pth murF (requalified) — UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanin murF PE_PGRS38 (family_assigned) — PE-PGRS family protein PE_PGRS38 PE_PGRS38 murE (requalified) — UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2%2C6-d murE murI (requalified) — glutamate racemase murI Rv3818 (requalified) — MBL fold metallo-hydrolase Rv3818 murX (requalified) — phospho-N-acetylmuramoyl-pentapeptide-transferase murX Rv3093c (requalified) — LLM class F420-dependent oxidoreductase Rv3093c Rv3520c (requalified) — coenzyme F420-dependent oxidoreductase Rv3520c Rv2951c (requalified) — phthiodiolone/phenolphthiodiolone dimycocerosates Rv2951c ftsQ (requalified) — cell division protein FtsQ ftsQ Rv2721c (family_assigned) — LGFP repeat-containing protein Rv2721c Rv2302 (family_assigned) — DUF1918 domain-containing protein Rv2302 Rv3481c (family_assigned) — GAP family protein Rv3481c Rv2556c (requalified) — secondary thiamine-phosphate synthase enzyme YjbQ Rv2556c cyp121 (requalified) — mycocyclosin synthase Cyp121 cyp121 PE_PGRS28 (family_assigned) — PE-PGRS family protein PE_PGRS28 PE_PGRS28 PE_PGRS43 (family_assigned) — PE-PGRS family protein PE_PGRS43 PE_PGRS43 PPE8 (family_assigned) — PPE family protein PPE8 PPE8 PPE56 (family_assigned) — PPE family protein PPE56 PPE56 PPE55 (family_assigned) — PPE family protein PPE55 PPE55 rplY (requalified) — 50S ribosomal protein L25/general stress protein C rplY ychF (requalified) — redox-regulated ATPase YchF ychF mfd (requalified) — transcription-repair coupling factor mfd lpqT (requalified) — lipoprotein LpqT lpqT mesJ (requalified) — tRNA lysidine(34) synthetase TilS mesJ atpH (family_assigned) — F0F1 ATP synthase subunit B/delta atpH murD (requalified) — UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase murD murG (requalified) — undecaprenyldiphospho-muramoylpentapeptide beta-N- murG ddlA (requalified) — D-alanine--D-alanine ligase DdlA ddlA ftsW (family_assigned) — putative lipid II flippase FtsW ftsW rsmH (requalified) — 16S rRNA (cytosine(1402)-N(4))-methyltransferase R rsmH Rv2164c (family_assigned) — hypothetical protein Rv2164c pbpB (requalified) — D%2CD-transpeptidase PbpB pbpB mraZ (requalified) — division/cell wall cluster transcriptional repress mraZ murC (requalified) — UDP-N-acetylmuramate--L-alanine ligase murC cysM (requalified) — O-phosphoserine sulfhydrylase cysM rdgB (family_assigned) — RdgB/HAM1 family non-canonical purine NTP pyrophos rdgB Rv1337 (family_assigned) — rhomboid family intramembrane serine protease Rv1337

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.