MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv2158c · 33 genes shown · anchor murF · open gene page → · ← back to 1 hop

Evidence: Min score 0
murE (requalified) — UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2%2C6-d murE murF (requalified) — UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanin murF murD (requalified) — UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase murD murG (requalified) — undecaprenyldiphospho-muramoylpentapeptide beta-N- murG murX (requalified) — phospho-N-acetylmuramoyl-pentapeptide-transferase murX murC (requalified) — UDP-N-acetylmuramate--L-alanine ligase murC ftsW (family_assigned) — putative lipid II flippase FtsW ftsW dapF (requalified) — diaminopimelate epimerase dapF ftsQ (requalified) — cell division protein FtsQ ftsQ lysA (requalified) — diaminopimelate decarboxylase lysA pbpB (requalified) — D%2CD-transpeptidase PbpB pbpB cobQ2 (requalified) — type 1 glutamine amidotransferase cobQ2 Rv2159c (family_assigned) — carboxymuconolactone decarboxylase family protein Rv2159c ddlA (requalified) — D-alanine--D-alanine ligase DdlA ddlA dapE (requalified) — succinyl-diaminopimelate desuccinylase DapE dapE miaA (requalified) — tRNA (adenosine(37)-N6)-dimethylallyltransferase M miaA Rv2728c (family_assigned) — hypothetical protein Rv2728c hflX (family_assigned) — GTP-binding protein HflX hflX Rv1024 (family_assigned) — septum formation initiator family protein Rv1024 thrA (requalified) — homoserine dehydrogenase thrA argS (requalified) — arginine--tRNA ligase argS thrC (requalified) — threonine synthase thrC dapB (requalified) — 4-hydroxy-tetrahydrodipicolinate reductase dapB Rv2164c (family_assigned) — hypothetical protein Rv2164c rsmH (requalified) — 16S rRNA (cytosine(1402)-N(4))-methyltransferase R rsmH pbpA (requalified) — D%2CD-transpeptidase PbpA pbpA Rv3712 (family_assigned) — Mur ligase family protein Rv3712 dnaQ (family_assigned) — DEDDh family exonuclease dnaQ dfp (requalified) — bifunctional phosphopantothenoylcysteine decarboxy dfp cobS (requalified) — adenosylcobinamide-GDP ribazoletransferase cobS Rv2160A (family_assigned) — Conserved hypothetical protein Rv2160A Rv2160c (family_assigned) — Conserved hypothetical protein Rv2160c Rv2161c (family_assigned) — TIGR03619 family F420-dependent LLM class oxidored Rv2161c

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.