MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv2152c · 25 genes shown · anchor murD · open gene page → · ← back to 1 hop

Evidence: Min score 0
murC (requalified) — UDP-N-acetylmuramate--L-alanine ligase murC murD (requalified) — UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase murD murG (requalified) — undecaprenyldiphospho-muramoylpentapeptide beta-N- murG ftsW (family_assigned) — putative lipid II flippase FtsW ftsW ftsQ (requalified) — cell division protein FtsQ ftsQ murX (requalified) — phospho-N-acetylmuramoyl-pentapeptide-transferase murX murE (requalified) — UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2%2C6-d murE ddlA (requalified) — D-alanine--D-alanine ligase DdlA ddlA murF (requalified) — UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanin murF murB (requalified) — UDP-N-acetylmuramate dehydrogenase murB pbpB (requalified) — D%2CD-transpeptidase PbpB pbpB yfiH (family_assigned) — laccase domain-containing protein yfiH ftsZ (requalified) — cell division protein FtsZ ftsZ Rv1024 (family_assigned) — septum formation initiator family protein Rv1024 alr (requalified) — alanine racemase alr murA (requalified) — UDP-N-acetylglucosamine 1-carboxyvinyltransferase murA lprQ (requalified) — L%2CD-transpeptidase LdtMt5 lprQ Rv0481c (family_assigned) — DUF2505 domain-containing protein Rv0481c Rv0480c (family_assigned) — carbon-nitrogen hydrolase family protein Rv0480c Rv2164c (family_assigned) — hypothetical protein Rv2164c rsmH (requalified) — 16S rRNA (cytosine(1402)-N(4))-methyltransferase R rsmH pbpA (requalified) — D%2CD-transpeptidase PbpA pbpA Rv2148c (family_assigned) — YggS family pyridoxal phosphate-dependent enzyme Rv2148c Rv2147c (requalified) — cell division protein SepF Rv2147c Rv2146c (family_assigned) — YggT family protein Rv2146c

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.