MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv2146c · 46 genes shown · anchor sepF · open gene page → · ← back to 1 hop

Evidence: Min score 0
Rv2146c (family_assigned) — YggT family protein Rv2146c Rv2147c (requalified) — cell division protein SepF Rv2147c wag31 (requalified) — cell wall synthesis protein Wag31 wag31 ftsZ (requalified) — cell division protein FtsZ ftsZ Rv2148c (family_assigned) — YggS family pyridoxal phosphate-dependent enzyme Rv2148c Rv2256c (dark) — hypothetical protein Rv2256c Rv2413c (family_assigned) — DNA polymerase III subunit delta Rv2413c Rv2144c (dark) — hypothetical protein Rv2144c rbpA (family_assigned) — RNA polymerase-binding protein RbpA rbpA gatB (family_assigned) — Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subun gatB Rv2680 (dark) — DUF3000 domain-containing protein Rv2680 Rv1002c (requalified) — dolichyl-phosphate-mannose--protein mannosyltransf Rv1002c Rv0807 (family_assigned) — sterol carrier family protein Rv0807 yfiH (family_assigned) — laccase domain-containing protein yfiH murF (requalified) — UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanin murF ponA2 (requalified) — bifunctional penicillin-insensitive transglycosyla ponA2 lprO (family_assigned) — phosphodiester glycosidase family protein lprO Rv2721c (family_assigned) — LGFP repeat-containing protein Rv2721c murG (requalified) — undecaprenyldiphospho-muramoylpentapeptide beta-N- murG ftsW (family_assigned) — putative lipid II flippase FtsW ftsW murC (requalified) — UDP-N-acetylmuramate--L-alanine ligase murC Rv2257c (family_assigned) — serine hydrolase domain-containing protein Rv2257c Rv2699c (dark) — DUF4193 domain-containing protein Rv2699c Rv2033c (family_assigned) — DUF3097 domain-containing protein Rv2033c Rv3644c (family_assigned) — DNA polymerase III subunit delta' Rv3644c dnaN (family_assigned) — DNA polymerase III subunit beta dnaN dnaZX (family_assigned) — DNA polymerase III subunits gamma/tau dnaZX dnaE1 (family_assigned) — DNA polymerase III subunit alpha dnaE1 Rv2191 (family_assigned) — hypothetical protein Rv2191 dnaQ (family_assigned) — DEDDh family exonuclease dnaQ rpoA (family_assigned) — DNA-directed RNA polymerase subunit alpha rpoA rpoZ (family_assigned) — DNA-directed RNA polymerase subunit omega rpoZ sigA (requalified) — RNA polymerase sigma factor sigA rpoC (family_assigned) — DNA-directed RNA polymerase subunit beta' rpoC rpoB (family_assigned) — DNA-directed RNA polymerase subunit beta rpoB sigB (family_assigned) — sigma-70 family RNA polymerase sigma factor SigB sigB gatA (family_assigned) — Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subun gatA gatC (family_assigned) — Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subun gatC aspS (requalified) — aspartate--tRNA ligase aspS amiD (requalified) — amidase amiD amiA2 (requalified) — amidase amiA2 amiB2 (requalified) — amidase amiB2 Rv2681 (requalified) — ribonuclease D Rv2681 hemQ (requalified) — hydrogen peroxide-dependent heme synthase hemQ echA15 (family_assigned) — enoyl-CoA hydratase/isomerase family protein echA15 rsmI (requalified) — 16S rRNA (cytidine(1402)-2'-O)-methyltransferase rsmI

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.